RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 PNPT1Q8TCS8 783 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 CREB3L4Q8TEY5 395 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 RGMAQ96B86 450 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 FCRL4Q96PJ5 515 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 MYCBPQ99417 103 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 CHID1Q9BWS9 393 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 ZNF717Q9BY31 904 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 MUC13Q9H3R2 512 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 SNX7Q9UNH6 387 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
TNFAIP3-209ENST00000619035 KNL1Q8NG31 2342 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 TDRD6O60522 2096 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CCDC163A0A0D9SF12 145 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 KIR2DS5A0A0G2JLQ3 304 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 A0A0G2JNG1 304 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 KIR2DS3K7RE56 304 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 GMNNO75496 209 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CLEC3AO75596 197 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 MAGP20916 626 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 PAX7P23759 505 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 SSR2P43308 183 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 TRPC1P48995 793 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ALDH9A1P49189 494 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 DMWDQ09019 674 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 KIR2DS5Q14953 304 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 FXNQ16595 210 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 TJAP1Q5JTD0 557 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ANXA8L1Q5VT79 327 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 FAM71E1Q6IPT2 247 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ZNF551Q7Z340 670 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 R3HCC1LQ7Z5L2 792 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 NUDT13Q86X67 352 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 PROSER1Q86XN7 944 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CLEC4FQ8N1N0 589 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ZNF548Q8NEK5 533 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 OR4A15Q8NGL6 344 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ZDHHC1Q8WTX9 485 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 KLHL31Q9H511 634 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 Q9H521 79 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 KAT8Q9H7Z6 458 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 TM9SF3Q9HD45 589 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ATAD3AQ9NVI7 634 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ATP6V1HQ9UI12 483 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 MAGEL2Q9UJ55 1249 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 SNRNP200O75643 2136 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 A0A1W2PR77 199 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 FAM221BA6H8Z2 402 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 EPN2O95208 641 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 PGM3O95394 542 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ANXA6P08133 673 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 UGT2B7P16662 529 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CCT8P50990 548 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 HNRNPFP52597 415 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 UBE2IP63279 158 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 HHEXQ03014 270 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 KIR2DS3Q14952 304 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 NKG7Q16617 165 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CAMKMTQ7Z624 323 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 AVL9Q8NBF6 648 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 LMX1AQ8TE12 382 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 COQ8BQ96D53 544 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 VPS50Q96JG6 964 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 OR2A14Q96R47 310 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 SARGQ9BW04 601 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 SYNPO2LQ9H987 977 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 LHX9Q9NQ69 397 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 CNOT11Q9UKZ1 510 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 DOLKQ9UPQ8 538 aa12.11□□□□□ -0.47
TNFAIP3-209ENST00000619035 ELOVL7A1L3X0 281 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 EVPLLA8MZ36 301 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 TLR4O00206 839 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 CLIC1O00299 241 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 DLGAP1O14490 977 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 ERI3O43414 337 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 FKBP9O95302 570 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 ENGP17813 658 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 RPL3P39023 403 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 COL9A2Q14055 689 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 TOR1AIP1Q5JTV8 583 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 OR4C11Q6IEV9 310 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 PPP4R4Q6NUP7 873 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 TSSK4Q6SA08 328 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 TBPL2Q6SJ96 375 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 ANGPTL8Q6UXH0 198 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 UBE3DQ7Z6J8 389 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 AMER3Q8N944 861 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 NCLNQ969V3 563 aa12.1□□□□□ -0.47
TNFAIP3-209ENST00000619035 CENPNQ96H22 339 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms