RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 POLLQ9UGP5 575 aa2.1□□□□□ -2.07
TARDBP-220ENST00000618606 CDH7Q9ULB5 785 aa2.1□□□□□ -2.07
TARDBP-220ENST00000618606 ODF2LQ9ULJ1 636 aa2.1□□□□□ -2.07
TARDBP-220ENST00000618606 LIPT1Q9Y234 373 aa2.1□□□□□ -2.07
TARDBP-220ENST00000618606 R4GN57 208 aa2.1□□□□□ -2.07
TARDBP-220ENST00000618606 A0A087WV48 116 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 IGHV3-38A0A0C4DH36 116 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 A0A1W2PQ72 361 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 TRIM49BA6NDI0 452 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 ARPC2O15144 300 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 AP5Z1O43299 807 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 TLX2O43763 284 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 VEGFDO43915 354 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 SELENOFO60613 162 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 OLFM2O95897 454 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 THY1P04216 161 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 DANCRP0C864 163 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 PCP11498 1178 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 EEF2P13639 858 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 HLA-DPA1P20036 260 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CASTP20810 708 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 PSMB4P28070 264 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CD86P42081 329 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 POLR2LP62875 67 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 ASIC1P78348 528 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 IL1RL1Q01638 556 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 KLC1Q07866 573 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 RPA4Q13156 261 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 SGCGQ13326 291 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 SHEQ5VZ18 495 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CNSTQ6PJW8 725 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 MOXD1Q6UVY6 613 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 NHLRC1Q6VVB1 395 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 C11orf57Q6ZUT1 292 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 KCTD9Q7L273 389 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 DET1Q7L5Y6 550 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 RNF130Q86XS8 419 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CNTN4Q8IWV2 1026 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 MMD2Q8IY49 270 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CD177Q8N6Q3 437 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 RTL3Q8N8U3 475 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 MRAPQ8TCY5 172 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CCDC47Q96A33 483 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 BSCL2Q96G97 398 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 ERO1AQ96HE7 468 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CCDC43Q96MW1 224 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 SPATA33Q96N06 139 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 LRRC3BQ96PB8 259 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 ATP6V0BQ99437 205 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CPNE1Q99829 537 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 CCDC3Q9BQI4 270 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 INPP5KQ9BT40 448 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 XPO4Q9C0E2 1151 aaKnown RBP2.09□□□□□ -2.07
TARDBP-220ENST00000618606 TMEM206Q9H813 350 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 MINDY3Q9H8M7 445 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 IL17BQ9UHF5 180 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 IKZF3Q9UKT9 509 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 PLCL2Q9UPR0 1127 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 PADI2Q9Y2J8 665 aa2.09□□□□□ -2.07
TARDBP-220ENST00000618606 A0A1W2PPQ1 181 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 C5orf51A6NDU8 294 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 NEMP2A6NFY4 417 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 C5orf52A6NGY3 159 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 SLC33A1O00400 549 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 CLDN4O14493 209 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 IFIT3O14879 490 aaKnown RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 OGTO15294 1046 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 ZBTB14O43829 449 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 RTN2O75298 545 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 RLN1P04808 185 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 VIMP08670 466 aaKnown RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 RAB40ALP0C0E4 278 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 HAPLN1P10915 354 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 ZNF19P17023 458 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 EDNRAP25101 427 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 CD27P26842 260 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 GMPSP49915 693 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 DNA2P51530 1060 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 ZNF75DP51815 510 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 MAPK12P53778 367 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 NAGLUP54802 743 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 SLC12A3P55017 1021 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 FKBP3Q00688 224 aaKnown RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 NPRL3Q12980 569 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 CBX3Q13185 183 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 SRSF9Q13242 221 aaKnown RBP eCLIP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 MORF4L2Q15014 288 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 PHKG1Q16816 387 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 C2orf76Q3KRA6 126 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 GPR33Q49SQ1 333 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 PARP10Q53GL7 1025 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 PODNL1Q6PEZ8 512 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 ISLR2Q6UXK2 745 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 CATSPER4Q7RTX7 472 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 ARHGAP22Q7Z5H3 698 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 PEX5LQ8IYB4 626 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 MAML2Q8IZL2 1156 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-220ENST00000618606 LGI2Q8N0V4 545 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 C4orf32Q8N8J7 132 aa2.08□□□□□ -2.08
TARDBP-220ENST00000618606 OR7G3Q8NG95 312 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms