RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GRIA2P42262 883 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 GJA9P57773 515 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 MVKQ03426 396 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 PLEKHS1Q5SXH7 462 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 DAZLQ92904 295 aaKnown RBP10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 ITPAQ9BY32 194 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 RMI1Q9H9A7 625 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 WDR45Q9Y484 360 aa10.8□□□□□ -0.68
CCDC144B-208ENST00000618081 ASCC3Q8N3C0 2202 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 SOWAHBA6NEL2 793 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PCP4L1A6NKN8 68 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 HLA-DPB1P04440 258 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 CHRM5P08912 532 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 RABGGTBP53611 331 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 KIAA0100Q14667 2235 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 TRAM2Q15035 370 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 TRIM43Q96BQ3 446 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 GIN1Q9NXP7 522 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 OR5K4A6NMS3 321 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 SHOX2O60902 331 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 C8BP07358 591 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 FAM163BP0C2L3 166 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 TLE2Q04725 743 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 FBXL22Q6P050 247 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF783Q6ZMS7 281 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 FITM2Q8N6M3 262 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 STOML3Q8TAV4 291 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 RAB9BQ9NP90 201 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 TCRBV7S2A1N4TA0A589 114 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 RPS13P62277 151 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF33AQ06730 810 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 LASP1Q14847 261 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PITRM1Q5JRX3 1037 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 GTF2IRD2BQ6EKJ0 949 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 C22orf39Q6P5X5 142 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 GTF2IRD2Q86UP8 949 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 GALNT11Q8NCW6 608 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 TMEM203Q969S6 136 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 AURKBQ96GD4 344 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 NTPCRQ9BSD7 190 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 YTHDF1Q9BYJ9 559 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF358Q9NW07 568 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 RBMX2Q9Y388 322 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 LAMA4Q16363 1823 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 LSM1O15116 133 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 VILLO15195 856 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PROM1O43490 865 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 MSX1P28360 303 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 UGT2B10P36537 528 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 POU6F2P78424 691 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 SERINC3Q13530 473 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ODF4Q2M2E3 257 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 TMEM35AQ53FP2 167 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 DCDC5Q6ZRR9 648 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZDHHC14Q8IZN3 488 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 DEFB119Q8N690 84 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 CLEC4DQ8WXI8 215 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ALPK1Q96QP1 1244 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PELOQ9BRX2 385 aaKnown RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 DNTTIP1Q9H147 329 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 A0A0G2JPF8 293 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 HNRNPCL3B7ZW38 293 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 LDB2O43679 373 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 HNRNPCL4P0DMR1 293 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 HMGCS1Q01581 520 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 CARTPTQ16568 116 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 KIAA0895LQ68EN5 471 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF517Q6ZMY9 492 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 GOLGA7Q7Z5G4 137 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 NPAS3Q8IXF0 933 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 FAM156AQ8NDB6 213 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 NSMAFQ92636 917 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF446Q9NWS9 450 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 OAZ3Q9UMX2 235 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 SH2B3Q9UQQ2 575 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PIK3C2AO00443 1686 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 FXYD6-FXYD2A0A087WZ82 144 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 H7C417 338 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 EI24O14681 340 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 MAN2A2P49641 1150 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 GRM2Q14416 872 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF805Q5CZA5 627 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 SLC15A3Q8IY34 581 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PACRGLQ8N7B6 248 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 C4orf32Q8N8J7 132 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 SUN5Q8TC36 379 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 CGREF1Q99674 301 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 CD244Q9BZW8 370 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 FXYD6Q9H0Q3 95 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 PRTFDC1Q9NRG1 225 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 HRASLS2Q9NWW9 162 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 CMAHPQ9Y471 501 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 OR51F1A6NGY5 319 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 HCRTR2O43614 444 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 UQCRC2P22695 453 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 RNF130Q86XS8 419 aa10.79□□□□□ -0.68
CCDC144B-208ENST00000618081 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms