RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LYSMD4Q5XG99 296 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 CPSF7Q8N684 471 aaKnown RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 SLC6A16Q9GZN6 736 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 XKP51811 444 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 TEAD2Q15562 447 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 IL20RBQ6UXL0 311 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 DCBLD1Q8N8Z6 715 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 C7orf57Q8NEG2 295 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 POLR2J3Q9H1A7 115 aaKnown RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 VSX1Q9NZR4 365 aaPredicted RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 RAP2CQ9Y3L5 183 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 MANBAO00462 879 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 ERBB2P04626 1255 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 AIF1P55008 147 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 RRADP55042 308 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 UBE2G2P60604 165 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 GRB10Q13322 594 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 OR4K15Q8NH41 348 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 TMEM98Q9Y2Y6 226 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 CNIH1O95406 144 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 C8orf89P0DMQ9 161 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 YBEYP58557 167 aaPredicted RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 GLYATQ6IB77 296 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 GRAMD2AQ8IUY3 354 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 SHKBP1Q8TBC3 707 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 DPF1Q92782 380 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 FABP12A6NFH5 140 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 SLC6A4P31645 630 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 PPP4CP60510 307 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 RPS21P63220 83 aaKnown RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.45
TCF4-248ENST00000616053 GBX1Q14549 363 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 AMIGO2Q86SJ2 522 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 ST7LQ8TDW4 575 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 ZNF347Q96SE7 839 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 MYNNQ9NPC7 610 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 TIMM22Q9Y584 194 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 PRKCGP05129 697 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 RAB8AP61006 207 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 SLC35G1Q2M3R5 365 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 PIWIL2Q8TC59 973 aaKnown RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 PXYLP1Q8TE99 480 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 NTPCRQ9BSD7 190 aaKnown RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 SUV39H2Q9H5I1 410 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
TCF4-248ENST00000616053 CUTCQ9NTM9 273 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 LRIT1Q9P2V4 623 aa12.23□□□□□ -0.45
TCF4-248ENST00000616053 POLR1CO15160 346 aaPredicted RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 KLK1P06870 262 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 SHMT1P34896 483 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 CLCNKBP51801 687 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 GALNT6Q8NCL4 622 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 NPFFR2Q9Y5X5 522 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 HEATR1Q9H583 2144 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 LRCH4O75427 683 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 CCNKO75909 580 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 NTSR2O95665 410 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 IGHEP01854 428 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 COL6A2P12110 1019 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 FRZBQ92765 325 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 DDIT4LQ96D03 193 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 S100A16Q96FQ6 103 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 TCF12Q99081 682 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 TPPP3Q9BW30 176 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 FKRPQ9H9S5 495 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 ZBTB20Q9HC78 741 aaPredicted RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 AURKAO14965 403 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 ANGPTL7O43827 346 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 ST3GAL1Q11201 340 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 DUSP28Q4G0W2 176 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 CUZD1Q86UP6 607 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 OR5L1Q8NGL2 311 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 RSC1A1Q92681 617 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SPTSSAQ969W0 71 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 LPAR4Q99677 370 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 RBM24Q9BX46 236 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 C8orf33Q9H7E9 229 aaPredicted RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 SRRM3A6NNA2 597 aaPredicted RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 H7C2Y5 167 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 GLB1P16278 677 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 GDF1P27539 372 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 EPHA5P54756 1037 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 KLF10Q13118 480 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 SF3A2Q15428 464 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 OR8B8Q15620 311 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 NSDHLQ15738 373 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 RBM20Q5T481 1227 aaKnown RBP12.22□□□□□ -0.45
TCF4-248ENST00000616053 GLT8D1Q68CQ7 371 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 PGAM4Q8N0Y7 254 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 IGDCC4Q8TDY8 1250 aa12.22□□□□□ -0.45
TCF4-248ENST00000616053 LMF2Q9BU23 707 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms