RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ARL1P40616 181 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-211ENST00000615061 CDH13P55290 713 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 SKP1P63208 163 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 RHAGQ02094 409 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 MYBPC3Q14896 1274 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 PCOLCEQ15113 449 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 LIPJQ5W064 366 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 EMBQ6PCB8 327 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 PRICKLE2Q7Z3G6 844 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 UBE3DQ7Z6J8 389 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 CA13Q8N1Q1 262 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 HUS1BQ8NHY5 278 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 UBE2E3Q969T4 207 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 QRFPRQ96P65 431 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 OR1F2PQ96R84 312 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 OR51B5Q9H339 312 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 C12orf65Q9H3J6 166 aaKnown RBP15.76■□□□□ 0.11
CBWD3-211ENST00000615061 ZBTB20Q9HC78 741 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-211ENST00000615061 TMCO1Q9UM00 188 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 FLNCQ14315 2725 aa15.76■□□□□ 0.11
CBWD3-211ENST00000615061 LOC102723996A0A087X1L8 192 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 NSG1A0A0A6YYJ2 146 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 CDH16O75309 829 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 HPP00738 406 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 NUDT17P0C025 328 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 NEK2P51955 445 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 CCNG1P51959 295 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 BTG2P78543 158 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 TRAF3Q13114 568 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 ABRAXAS2Q15018 415 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 NIPAL1Q6NVV3 410 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 METTL2BQ6P1Q9 378 aaKnown RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 TRIM40Q6P9F5 258 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF793Q6ZN11 406 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 NDUFAF7Q7L592 441 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF605Q86T29 641 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 L3MBTL4Q8NA19 623 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 METTL21AQ8WXB1 218 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 CAVIN3Q969G5 261 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 ATP6V1E2Q96A05 226 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 A0A1W2PQ72 361 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 SUV39H1O43463 412 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 SEC24DO94855 1032 aaPredicted RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 RNH1P13489 461 aaKnown RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 DEKP35659 375 aaKnown RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 SOX8P57073 446 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 RASA2Q15283 850 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 ANKRD37Q7Z713 158 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 LCA5Q86VQ0 697 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 C4orf33Q8N1A6 199 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF483Q8TF39 744 aaPredicted RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 THOC3Q96J01 351 aaKnown RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 TMEM237Q96Q45 408 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 SMAD5Q99717 465 aaKnown RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 SORBS1Q9BX66 1292 aaKnown RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 PPCSQ9HAB8 311 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 PRDM7Q9NQW5 492 aa15.75■□□□□ 0.11
CBWD3-211ENST00000615061 HEMK1Q9Y5R4 338 aaPredicted RBP15.75■□□□□ 0.11
CBWD3-211ENST00000615061 MAGEB17A8MXT2 336 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 H0YIV9 168 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 PYCARD-AS1I3L0S3 204 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 UGDHO60701 494 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 CLDN9O95484 217 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 GSTA1P08263 222 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 TAC1P20366 129 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 MAOAP21397 527 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 CD97P48960 835 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 HNRNPFP52597 415 aaKnown RBP15.74■□□□□ 0.11
CBWD3-211ENST00000615061 RPS13P62277 151 aaKnown RBP15.74■□□□□ 0.11
CBWD3-211ENST00000615061 ZRSR2Q15696 482 aaKnown RBP15.74■□□□□ 0.11
CBWD3-211ENST00000615061 NSDHLQ15738 373 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 NADK2Q4G0N4 442 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 TMEM52Q8NDY8 209 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 WDR20Q8TBZ3 569 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 MTFMTQ96DP5 389 aaKnown RBP15.74■□□□□ 0.11
CBWD3-211ENST00000615061 VPS50Q96JG6 964 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 WDR77Q9BQA1 342 aaPredicted RBP15.74■□□□□ 0.11
CBWD3-211ENST00000615061 C1QTNF3Q9BXJ4 246 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF700Q9H0M5 742 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 DMRT3Q9NQL9 472 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 DCDC2Q9UHG0 476 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF225Q9UK10 706 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 G3BP2Q9UN86 482 aaKnown RBP15.74■□□□□ 0.11
CBWD3-211ENST00000615061 PCDHGA11Q9Y5H2 935 aa15.74■□□□□ 0.11
CBWD3-211ENST00000615061 PSMD12O00232 456 aaPredicted RBP15.73■□□□□ 0.11
CBWD3-211ENST00000615061 B3GALT2O43825 422 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 SLC28A2O43868 658 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 ETHE1O95571 254 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 KRT4P19013 534 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 IL10P22301 178 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 MTTPP55157 894 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 HERVK_113P63132 956 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 UNC50Q53HI1 259 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 ZNF678Q5SXM1 525 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 DEPDC1Q5TB30 811 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 VWA5B1Q5TIE3 1220 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 KHDRBS2Q5VWX1 349 aaKnown RBP15.73■□□□□ 0.11
CBWD3-211ENST00000615061 CPEB2Q7Z5Q1 589 aaKnown RBP15.73■□□□□ 0.11
CBWD3-211ENST00000615061 FAM47BQ8NA70 645 aa15.73■□□□□ 0.11
CBWD3-211ENST00000615061 TEX19Q8NA77 164 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms