RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MYOCQ99972 504 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 PTPRHQ9HD43 1115 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TEX10Q9NXF1 929 aaPredicted RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 NFASCO94856 1347 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 C13orf42A0A1B0GVH6 325 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 OR2AG2A6NM03 316 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SNNO75324 88 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 NKX2-5P52952 324 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 RRAS2P62070 204 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 BAATQ14032 418 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 TCEANCQ8N8B7 351 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 RNF128Q8TEB7 428 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.49□□□□□ -1.05
TTC28-208ENST00000612946 POMT1Q9Y6A1 747 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 CLIC1O00299 241 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 RNF13O43567 381 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 EPOP01588 193 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 CLEC6AQ6EIG7 209 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 C7orf57Q8NEG2 295 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ACOT11Q8WXI4 607 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 AKT1S1Q96B36 256 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 PGAP3Q96FM1 320 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 CRAMP1Q96RY5 1269 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 HSD3B7Q9H2F3 369 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ITM2CQ9NQX7 267 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 TUBG2Q9NRH3 451 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 TOR1AO14656 332 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 HLA-DMAP28067 261 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 KCNAB2Q13303 367 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 IRF4Q15306 451 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SLC27A4Q6P1M0 643 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 MRPL41Q8IXM3 137 aaKnown RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 OCSTAMPQ9BR26 566 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 FBXO8Q9NRD0 319 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SDHAF2Q9NX18 166 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 MROH1Q8NDA8 1641 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ARPC5O15511 151 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 AQP1P29972 269 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ELP2Q6IA86 826 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 UQCC3Q6UW78 93 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 PHTF2Q8N3S3 785 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 TOP6BLQ8N6T0 577 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SYT14Q8NB59 555 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 OR2AP1Q8NGE2 309 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 C17orf62Q9BQA9 187 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 RBFOX1Q9NWB1 397 aaKnown RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 MARCH2Q9P0N8 246 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 CLCA3PQ9Y6N3 262 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 TEX13DA0A0J9YY54 714 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 GPX6P59796 221 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ARFRP1Q13795 201 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 OR1M1Q8NGA1 313 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 FANK1Q8TC84 345 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SLC35G5Q96KT7 338 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ACTRT3Q9BYD9 372 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 AHSA1O95433 338 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 PNPP00491 289 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 PFKPQ01813 784 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 NPNTQ6UXI9 565 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 GPAT4Q86UL3 456 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SLC35A5Q9BS91 424 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 DOHHQ9BU89 302 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 CAPN10Q9HC96 672 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 NPC1O15118 1278 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ASGR1P07306 291 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SLC43A3Q8NBI5 491 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.05
TTC28-208ENST00000612946 SEMA3CQ99985 751 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 TOX4O94842 621 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ELK4P28324 431 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 NAE1Q13564 534 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 RTL6Q6ICC9 239 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 FAM83HQ6ZRV2 1179 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 RAB11FIP5Q9BXF6 653 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 MKKSQ9NPJ1 570 aaPredicted RBP8.49□□□□□ -1.05
TTC28-208ENST00000612946 WNT9AO14904 365 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 CXCL8P10145 99 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 TPRA1Q86W33 373 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 CYP2W1Q8TAV3 490 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 ZNF382Q96SR6 550 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 SPTBP11277 2137 aa8.49□□□□□ -1.05
TTC28-208ENST00000612946 VILLO15195 856 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 TSPAN8P19075 237 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PBX3P40426 434 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ST3GAL3Q11203 375 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 TRAM2Q15035 370 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 FIP1L1Q6UN15 594 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 SNX29P2Q8IUI4 249 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 SLC35B2Q8TB61 432 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 ZFAND1Q8TCF1 268 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 MUL1Q969V5 352 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 TSSK3Q96PN8 268 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PXMP2Q9NR77 195 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 FAM212BQ9NTI7 297 aaPredicted RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 PIKFYVEQ9Y2I7 2098 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 RPL17P18621 184 aaKnown RBP8.48□□□□□ -1.05
TTC28-208ENST00000612946 SSR2P43308 183 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 PCLAFQ15004 111 aa8.48□□□□□ -1.05
TTC28-208ENST00000612946 Q3ZCU0 254 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms