RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SELENONQ9NZV5 590 aa16.51■□□□□ 0.23
NEK3-206ENST00000611833 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
NEK3-206ENST00000611833 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.51■□□□□ 0.23
NEK3-206ENST00000611833 E9PQ18 207 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 ITGA2P17301 1181 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 PTX3P26022 381 aaPredicted RBP16.5■□□□□ 0.23
NEK3-206ENST00000611833 CTNNB1P35222 781 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 SOAT1P35610 550 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 GPR1P46091 355 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 IDH2P48735 452 aaKnown RBP16.5■□□□□ 0.23
NEK3-206ENST00000611833 VASPP50552 380 aaPredicted RBP16.5■□□□□ 0.23
NEK3-206ENST00000611833 TAP2Q03519 686 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 FADDQ13158 208 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 CYP27C1Q4G0S4 372 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 NXPE4Q6UWF7 544 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 RNF130Q86XS8 419 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 MYDGFQ969H8 173 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 ITPAQ9BY32 194 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 ALOXE3Q9BYJ1 711 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 EHD1Q9H4M9 534 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 AMBNQ9NP70 447 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 CCDC177Q9NQR7 707 aaPredicted RBP16.5■□□□□ 0.23
NEK3-206ENST00000611833 ITM2CQ9NQX7 267 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 RLIMQ9NVW2 624 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 PNMA8BQ9ULN7 279 aaPredicted RBP16.5■□□□□ 0.23
NEK3-206ENST00000611833 EFCAB9A8MZ26 197 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 ADH5P11766 374 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 IRS1P35568 1242 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 CLK1P49759 484 aaKnown RBP16.5■□□□□ 0.23
NEK3-206ENST00000611833 CDK6Q00534 326 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 PDE7AQ13946 482 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 INAQ16352 499 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 CYP2A13Q16696 494 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 MICAQ29983 383 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 EXOC3L2Q2M3D2 409 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 PERM1Q5SV97 790 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 UBE2UQ5VVX9 321 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 LGI4Q8N135 537 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 FCGR1BQ92637 280 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 PROX1Q92786 737 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 NXPE3Q969Y0 559 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 NUS1Q96E22 293 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 ZHX1-C8orf76Q96EF9 292 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 ALPK1Q96QP1 1244 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 SPNS1Q9H2V7 528 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 TMEM38AQ9H6F2 299 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 TRIM39Q9HCM9 518 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 MYNNQ9NPC7 610 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 IL23AQ9NPF7 189 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 C1GALT1Q9NS00 363 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 TAS2R9Q9NYW1 312 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 POFUT2Q9Y2G5 429 aa16.5■□□□□ 0.23
NEK3-206ENST00000611833 KIAA1549LQ6ZVL6 1849 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 A0A1W2PRB8 838 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 CLDN24A6NM45 220 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 PLK4O00444 970 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
NEK3-206ENST00000611833 IFNA14P01570 189 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 CDH3P22223 829 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 C21orf33P30042 268 aaPredicted RBP16.49■□□□□ 0.23
NEK3-206ENST00000611833 RELAQ04206 551 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 ELOAQ14241 798 aaKnown RBP16.49■□□□□ 0.23
NEK3-206ENST00000611833 SYT16Q17RD7 645 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 SLC5A12Q1EHB4 618 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 MPEG1Q2M385 716 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 FAM71E1Q6IPT2 247 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 OR6Q1Q8NGQ2 317 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 SPPL3Q8TCT6 385 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 UTP15Q8TED0 518 aaKnown RBP16.49■□□□□ 0.23
NEK3-206ENST00000611833 SLC38A4Q969I6 547 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 SIGLEC11Q96RL6 698 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 ARMC7Q9H6L4 198 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 ZNF556Q9HAH1 456 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 FBXO8Q9NRD0 319 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 PSORS1C1Q9UIG5 152 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 PMF1-BGLAPU3KQ54 211 aa16.49■□□□□ 0.23
NEK3-206ENST00000611833 PRRT4C9JH25 899 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 POP7O75817 140 aaKnown RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 PRNPP04156 253 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 BMPR1AP36894 532 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 TGFBR2P37173 567 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 CD97P48960 835 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 ZNF605Q86T29 641 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 ZNF547Q8IVP9 402 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 METTL4Q8N3J2 472 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 ZNF740Q8NDX6 193 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 OR4C15Q8NGM1 316 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 PHF10Q8WUB8 498 aaKnown RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 ARRDC3Q96B67 414 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 NIPSNAP1Q9BPW8 284 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 TMEM121BQ9BXQ6 578 aaPredicted RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 MIEF1Q9NQG6 463 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 FAM32AQ9Y421 112 aaKnown RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 TCF20Q9UGU0 1960 aaKnown RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 LZTS3O60299 673 aaPredicted RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 KRT75O95678 551 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 PORP16435 677 aaPredicted RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 TGFBR1P36897 503 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 KCNC4Q03721 635 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms