RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 MKL2Q9ULH7 1088 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 GPR52Q9Y2T5 361 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 COL2A1P02458 1487 aaPredicted RBP13.34□□□□□ -0.27
MUC1-223ENST00000611571 TRAV6A0A075B6T7 132 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 A0A1B0GW55 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 ZNF860A6NHJ4 632 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 NPIPB15A6NHN6 443 aaPredicted RBP13.34□□□□□ -0.27
MUC1-223ENST00000611571 CACNB4O00305 520 aaPredicted RBP13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4L2P0CJ85 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4L3P0CJ86 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4L4P0CJ87 422 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4L5P0CJ88 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4L6P0CJ89 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4L7P0CJ90 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 RAB15P59190 212 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 GRIK2Q13002 908 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 LRRC32Q14392 662 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 CHDHQ8NE62 594 aaPredicted RBP13.34□□□□□ -0.27
MUC1-223ENST00000611571 DPF3Q92784 378 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 DUX4Q9UBX2 424 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 TMED5Q9Y3A6 229 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 PCDHGA10Q9Y5H3 936 aa13.34□□□□□ -0.27
MUC1-223ENST00000611571 A0A1B0GTL3 188 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 FAM170BA6NMN3 283 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 PAK4O96013 591 aaPredicted RBP13.33□□□□□ -0.27
MUC1-223ENST00000611571 HIST1H2ABP04908 130 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 OR12D1P0DN82 309 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 C4BPBP20851 252 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 CRHBPP24387 322 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 ADRA1AP35348 466 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 ATAT1Q5SQI0 421 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 HIST3H2AQ7L7L0 130 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 HIST1H2ACQ93077 130 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 RHBDF1Q96CC6 855 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 RNF31Q96EP0 1072 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 GPR78Q96P69 363 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 HDHD5Q9BXW7 423 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 PLAC1Q9HBJ0 212 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 NEK6Q9HC98 313 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 TRPS1Q9UHF7 1281 aa13.33□□□□□ -0.27
MUC1-223ENST00000611571 FHP07954 510 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 SDC1P18827 310 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 ITIH1P19827 911 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 SSTR4P31391 388 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 CNR2P34972 360 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TUBA1BP68363 451 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TEAD2Q15562 447 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 ZNF311Q5JNZ3 666 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 RAB41Q5JT25 222 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 LDLRAD1Q5T700 205 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 REEP3Q6NUK4 255 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 VITQ6UXI7 678 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TUBA1AQ71U36 451 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 NLGN4XQ8N0W4 816 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 ATP6V1C2Q8NEY4 427 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 GTF2H4Q92759 462 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 PEX13Q92968 403 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 RDH12Q96NR8 316 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TUBA1CQ9BQE3 449 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 PDCD10Q9BUL8 212 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 SLC22A4Q9H015 551 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 IRF2BPLQ9H1B7 796 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 PAQR5Q9NXK6 330 aaPredicted RBP13.33□□□□□ -0.28
MUC1-223ENST00000611571 NCKAP1Q9Y2A7 1128 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 LEFTY2O00292 366 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 NDUFS4O43181 175 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.28
MUC1-223ENST00000611571 AP2S1P53680 142 aaPredicted RBP13.33□□□□□ -0.28
MUC1-223ENST00000611571 CDH11P55287 796 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.28
MUC1-223ENST00000611571 ZNF613Q6PF04 617 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 NUDT13Q86X67 352 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TMEM25Q86YD3 366 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 ANKRD13BQ86YJ7 626 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 GALNT13Q8IUC8 556 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 MFSD2AQ8NA29 543 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 OR51G2Q8NGK0 314 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 SH3YL1Q96HL8 342 aaPredicted RBP13.33□□□□□ -0.28
MUC1-223ENST00000611571 SGIP1Q9BQI5 828 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TMEM246Q9BRR3 403 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 ACPTQ9BZG2 426 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 REEP4Q9H6H4 257 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 ARNT2Q9HBZ2 717 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TDP1Q9NUW8 608 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 TAS2R9Q9NYW1 312 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 SLX4Q8IY92 1834 aa13.33□□□□□ -0.28
MUC1-223ENST00000611571 PTPRZ1P23471 2315 aaPredicted RBP13.33□□□□□ -0.28
MUC1-223ENST00000611571 LOC285095A0A1B0GVY8 99 aa13.32□□□□□ -0.28
MUC1-223ENST00000611571 FEZF1A0PJY2 475 aa13.32□□□□□ -0.28
MUC1-223ENST00000611571 ORC5O43913 435 aa13.32□□□□□ -0.28
MUC1-223ENST00000611571 B3GALT4O96024 378 aa13.32□□□□□ -0.28
MUC1-223ENST00000611571 CAPNS1P04632 268 aa13.32□□□□□ -0.28
MUC1-223ENST00000611571 MRPL3P09001 348 aaKnown RBP13.32□□□□□ -0.28
MUC1-223ENST00000611571 AKR1D1P51857 326 aa13.32□□□□□ -0.28
MUC1-223ENST00000611571 NDUFA5Q16718 116 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms