RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 C7orf34Q96L11 122 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 LRRN3Q9H3W5 708 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 ANXA3P12429 323 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 PHOX2BQ99453 314 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 KCNS2Q9ULS6 477 aa12.65□□□□□ -0.38
USP6NL-205ENST00000609104 NOGQ13253 232 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 KCNJ11Q14654 390 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 DECR1Q16698 335 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 OR4K1Q8NGD4 311 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 NSMAFQ92636 917 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 EFCAB11Q9BUY7 163 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 STRA6Q9BX79 667 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 FZD3Q9NPG1 666 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 GLS2Q9UI32 602 aa12.65□□□□□ -0.39
USP6NL-205ENST00000609104 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.39
USP6NL-205ENST00000609104 ANKRD66B4E2M5 251 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 MAPK3P27361 379 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 TREX2Q9BQ50 279 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 TOXO94900 526 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 HSD3B1P14060 373 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 S100PP25815 95 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 MAP2K4P45985 399 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PIGFQ07326 219 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 SH3YL1Q96HL8 342 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PIGVQ9NUD9 493 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PET100P0DJ07 73 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PCLAFQ15004 111 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 ASTE1Q2TB18 679 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 FLRT2O43155 660 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PLATP00750 562 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 SPARCP09486 303 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 OR51B5Q9H339 312 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 SEC14L4Q9UDX3 406 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 IRAK2O43187 625 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 EEF1E1O43324 174 aaKnown RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 GLP1RP43220 463 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 ERMP1Q7Z2K6 904 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 Q9N2J8 555 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 C11orf98E9PRG8 122 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 H0YJX3 145 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 DLGAP1O14490 977 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PTGR1Q14914 329 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 PPP1R3AQ16821 1122 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 CDH10Q9Y6N8 788 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 USP2O75604 605 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 RABL3Q5HYI8 236 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 SLC39A4Q6P5W5 647 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 Q8N9G6 341 aaPredicted RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM68Q96MH6 324 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 BTBD1Q9H0C5 482 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 WASF3Q9UPY6 502 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 AGTR2P50052 363 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF45Q02386 682 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 MBLAC2Q68D91 279 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 UBE2Q1Q7Z7E8 422 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 MMP20O60882 483 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 ADH5P11766 374 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 TAS2R43P59537 309 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM69Q5SWH9 247 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 OR6N1Q8NGY5 312 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM98Q9Y2Y6 226 aa12.64□□□□□ -0.39
USP6NL-205ENST00000609104 EXOSC1Q9Y3B2 195 aaKnown RBP12.64□□□□□ -0.39
USP6NL-205ENST00000609104 B8ZZF3 427 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM156Q8N614 296 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 DEFB119Q8N690 84 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 ATPIF1Q9UII2 106 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 POP7O75817 140 aaKnown RBP12.63□□□□□ -0.39
USP6NL-205ENST00000609104 SLC6A6P31641 620 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF41P51814 821 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-205ENST00000609104 ID2Q02363 134 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 IRF5Q13568 498 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 NPAS3Q8IXF0 933 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 DNAAF1Q8NEP3 725 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 PCDHB11Q9Y5F2 797 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 MANBAO00462 879 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 Q6ZVU0 165 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 CNIH3Q8TBE1 160 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 CLEC4DQ8WXI8 215 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF717Q9BY31 904 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-205ENST00000609104 MGAT4CQ9UBM8 478 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 HCN4Q9Y3Q4 1203 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 A0A1W2PQ45 241 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-205ENST00000609104 A0A1W2PQY0 241 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 TVP23AA6NH52 213 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 SLC19A2O60779 497 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 TMIGD1Q6UXZ0 262 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 OR51G2Q8NGK0 314 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 SIX2Q9NPC8 291 aa12.63□□□□□ -0.39
USP6NL-205ENST00000609104 CD8B2A6NJW9 211 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms