RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 DVL2O14641 736 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SMAD7O15105 426 aaKnown RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CEP104O60308 925 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 OR2J2O76002 312 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 VAPBO95292 243 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 IFNB1P01574 187 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 APRTP07741 180 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZNF888P0CJ79 500 aaPredicted RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CDH1P12830 882 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CD53P19397 219 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NMBRP28336 390 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GRK3P35626 688 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FDFT1P37268 417 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SKIV2L2P42285 1042 aaKnown RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MAN2A2P49641 1150 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CLCN7P51798 805 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SKP1P63208 163 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PPP2R2BQ00005 443 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 KLF1Q13351 362 aaPredicted RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RPS6KA1Q15418 735 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TTLL9Q3SXZ7 439 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 IL20RBQ6UXL0 311 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 C17orf64Q86WR6 236 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GPALPP1Q8IXQ4 340 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ASB15Q8WXK1 588 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NCLNQ969V3 563 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SARAFQ96BY9 339 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 LRRC46Q96FV0 321 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RHBGQ9H310 441 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 EXO5Q9H790 373 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 LIN28AQ9H9Z2 209 aaKnown RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PRDM9Q9NQV7 894 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TRMT1Q9NXH9 659 aaKnown RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ADAM21Q9UKJ8 722 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 YARS2Q9Y2Z4 477 aaKnown RBP10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PCDHA13Q9Y5I0 950 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SYCE3A1L190 88 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CLCA1A8K7I4 914 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 HSPB2A8KAH6 182 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PSMD12O00232 456 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PFDN6O15212 129 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ARHGEF9O43307 516 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZBTB14O43829 449 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PRKNO60260 465 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SERPIND1P05546 499 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PPP2R1BP30154 601 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SOX3P41225 446 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ADARP55265 1226 aaKnown RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 POU4F3Q15319 338 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 HSPB2Q16082 182 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 XKR6Q5GH73 641 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CES3Q6UWW8 571 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SEM1Q6ZVN7 128 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PRUNE1Q86TP1 453 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CXorf67Q86X51 503 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SLC13A5Q86YT5 568 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 VSTM4Q8IW00 320 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NAXEQ8NCW5 288 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ALKBH8Q96BT7 664 aaKnown RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 VMP1Q96GC9 406 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PDLIM2Q96JY6 352 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FAM173AQ9BQD7 235 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CCDC77Q9BR77 488 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 YIPF4Q9BSR8 244 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PCBD2Q9H0N5 130 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 LDAHQ9H6V9 325 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 IL1RL2Q9HB29 575 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SAMD15Q9P1V8 674 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZFATQ9P243 1243 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SPRR3Q9UBC9 169 aa10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MTRF1LQ9UGC7 380 aaKnown RBP10.91□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GFYI3L273 518 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 OR1F1O43749 312 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SUSD5O60279 629 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZFAND5O76080 213 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 EPXP11678 715 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RNH1P13489 461 aaKnown RBP10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GABRA1P14867 456 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ENDOUP21128 410 aaKnown RBP10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NAP1L1P55209 391 aaKnown RBP10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 WNT3P56703 355 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RAB8AP61006 207 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PWP1Q13610 501 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TERF2Q15554 542 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZNF750Q32MQ0 723 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FBXL19-AS1Q494R0 122 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 HECTD2Q5U5R9 776 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NIPAL1Q6NVV3 410 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MBOAT1Q6ZNC8 495 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RTL4Q6ZR62 310 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FAM47EQ6ZV65 393 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 UBE2R2Q712K3 238 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PIWIL4Q7Z3Z4 852 aaKnown RBP10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CNGA4Q8IV77 575 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 P3H2Q8IVL5 708 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ULK2Q8IYT8 1036 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SIMC1Q8NDZ2 872 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 LINC01560Q8TB33 94 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MFSD3Q96ES6 412 aa10.9□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CAPZA3Q96KX2 299 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms