RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SFT2D3Q587I9 215 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 OR4F3Q6IEY1 312 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 METTL25Q8N6Q8 603 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 NAT8LQ8N9F0 302 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF451Q9Y4E5 1061 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TEX264Q9Y6I9 313 aa9.3□□□□□ -0.92
CSMD1-217ENST00000602723 TTC24A2A3L6 582 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RFPL1O75677 317 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CSKP41240 450 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CILP2Q8IUL8 1156 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 NPAS4Q8IUM7 802 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 KLK6Q92876 244 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 SMARCD2Q92925 531 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 OTUB2Q96DC9 234 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 C16orf58Q96GQ5 468 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 DPYSL5Q9BPU6 564 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 MGAT4CQ9UBM8 478 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 KCNS2Q9ULS6 477 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 EXOSC1Q9Y3B2 195 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 FBP2O00757 339 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RBMXP38159 391 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF423Q2M1K9 1284 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF630Q2M218 657 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 SLC16A9Q7RTY1 509 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 HAS3O00219 553 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RNF13O43567 381 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 HTR2BP41595 481 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 FAXDC2Q96IV6 333 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 TTTY10Q9BZA0 68 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 C12orf71A8MTZ7 269 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 INMT-MINDY4F8WBC2 141 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 PRKCGP05129 697 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 GP1BBP13224 206 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 GOLGA7Q7Z5G4 137 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 NPAS3Q8IXF0 933 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CACNA1IQ9P0X4 2223 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 A0A1W2PPW3 197 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 GPR25O00155 361 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RIPPLY1Q0D2K3 151 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ST3GAL3Q11203 375 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ALG10BQ5I7T1 473 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 LYSMD3Q7Z3D4 306 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ELMOD2Q8IZ81 293 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 OR5M3Q8NGP4 307 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF675Q8TD23 568 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 C7orf34Q96L11 122 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM74Q96NL1 305 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 DCCP43146 1447 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 FARS2O95363 451 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CLIC3O95833 236 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 G6PDP11413 515 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RPL17P18621 184 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 THOC6Q86W42 341 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 NPLQ9BXD5 320 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 MYNNQ9NPC7 610 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 IL36AQ9UHA7 158 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 A8MUA0 341 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 IL3P08700 152 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 MATN1P21941 496 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 SLC6A6P31641 620 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ABRAXAS2Q15018 415 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RABL3Q5HYI8 236 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 TXNDC5Q8NBS9 432 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 COL20A1Q9P218 1284 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 C9J4A7 227 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 HTRA2O43464 458 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ACP5P13686 325 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 RPS2P15880 293 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 UGT2B10P36537 528 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 TRAM2Q15035 370 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CERS5Q8N5B7 392 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ENDOVQ8N8Q3 282 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF599Q96NL3 588 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 DERL2Q9GZP9 239 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ERVK-19Q9WJR5 959 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 XRN1Q8IZH2 1706 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 F5H0A9 414 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 C6orf47O95873 294 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 PLATP00750 562 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 PTNP21246 168 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 S1PR1P21453 382 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 NAPRTQ6XQN6 538 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 ZSCAN1Q8NBB4 408 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 CCM2Q9BSQ5 444 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 PCDHB16Q9NRJ7 776 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 SDHAF3Q9NRP4 125 aa9.29□□□□□ -0.92
CSMD1-217ENST00000602723 MYO5AQ9Y4I1 1855 aaKnown RBP9.29□□□□□ -0.92
CSMD1-217ENST00000602723 APOC3P02656 99 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ATP1B2P14415 290 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 BDKRB1P46663 353 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ARSFP54793 590 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 MLLT10P55197 1068 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 KCNC4Q03721 635 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ABHD18Q0P651 414 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF280BQ86YH2 543 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms