RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 PPFIBP2Q8ND30 876 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 OR9A1PQ8NGU1 263 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 VMP1Q96GC9 406 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 LCORQ96JN0 433 aaPredicted RBP13.16□□□□□ -0.3
TRIM11-205ENST00000602308 TBL1YQ9BQ87 522 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 PRDM14Q9GZV8 571 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 ZNF226Q9NYT6 803 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 MYOTQ9UBF9 498 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 LPAR3Q9UBY5 353 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 PPIEQ9UNP9 301 aaKnown RBP13.16□□□□□ -0.3
TRIM11-205ENST00000602308 ZNF281Q9Y2X9 895 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
TRIM11-205ENST00000602308 PRKDCP78527 4128 aaKnown RBP13.16□□□□□ -0.3
TRIM11-205ENST00000602308 C15orf38-AP3S2A0A0A6YYH1 394 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 F8W8V4 182 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 SNPHO15079 494 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 TMCC2O75069 709 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 ZFAND5O76080 213 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 CCNDBP1O95273 360 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 B3GALT4O96024 378 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 P04436 131 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 PSMA3P25788 255 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 IDUAP35475 653 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 ACVR1BP36896 505 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 UBE2HP62256 183 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 FAM27E3Q08E93 113 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 DUSP8Q13202 625 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 TMED2Q15363 201 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 BTLAQ7Z6A9 289 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 RASGEF1CQ8N431 466 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 ARIH2OSQ8N7S6 290 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 GOLM1Q8NBJ4 401 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 FBXO15Q8NCQ5 510 aaPredicted RBP13.15□□□□□ -0.3
TRIM11-205ENST00000602308 MAGEC3Q8TD91 643 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 QKIQ96PU8 341 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM11-205ENST00000602308 TSSK1BQ9BXA7 367 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 ANGPTL4Q9BY76 406 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 SAMD15Q9P1V8 674 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 AAR2Q9Y312 384 aaKnown RBP13.15□□□□□ -0.3
TRIM11-205ENST00000602308 SLC22A7Q9Y694 548 aa13.15□□□□□ -0.3
TRIM11-205ENST00000602308 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.31
TRIM11-205ENST00000602308 LRRC10BA6NIK2 292 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 A8MXE2 369 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 CST8O60676 142 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 KRT1P04264 644 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 ABATP80404 500 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 OCRLQ01968 901 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 SEMA3AQ14563 771 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 POU6F1Q14863 301 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 ETFDHQ16134 617 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 FAM174BQ3ZCQ3 159 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 DNM1P46Q6ZS02 220 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
TRIM11-205ENST00000602308 AFAP1L2Q8N4X5 818 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 CAMKVQ8NCB2 501 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 SGMS2Q8NHU3 365 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 GSDMBQ8TAX9 411 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 HAUS1Q96CS2 278 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 SGCZQ96LD1 299 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 CCDC77Q9BR77 488 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 SHARPINQ9H0F6 387 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 CTTNBP2NLQ9P2B4 639 aa13.14□□□□□ -0.31
TRIM11-205ENST00000602308 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
TRIM11-205ENST00000602308 TSR3Q9UJK0 312 aaKnown RBP13.14□□□□□ -0.31
TRIM11-205ENST00000602308 LRRC3CA6NJW4 275 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-205ENST00000602308 SRD5A1P18405 259 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 RBL1P28749 1068 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 COILP38432 576 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-205ENST00000602308 SLCO1A2P46721 670 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 PNLIPRP1P54315 467 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 RPS15AP62244 130 aaKnown RBP13.13□□□□□ -0.31
TRIM11-205ENST00000602308 TERF2Q15554 542 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 P3H1Q32P28 736 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ANKRD20A4Q4UJ75 823 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 CT47A1Q5JQC4 288 aaPredicted RBP13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ANKRD20A2Q5SQ80 823 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ANKRD20A1Q5TYW2 823 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ITPRIPL1Q6GPH6 555 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 SLC44A1Q8WWI5 657 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 FOPNLQ96NB1 174 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
TRIM11-205ENST00000602308 MED18Q9BUE0 208 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 SLCO5A1Q9H2Y9 848 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ESRP2Q9H6T0 727 aaKnown RBP13.13□□□□□ -0.31
TRIM11-205ENST00000602308 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 ZFATQ9P243 1243 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 CAMK2AQ9UQM7 478 aa13.13□□□□□ -0.31
TRIM11-205ENST00000602308 FREM3P0C091 2139 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms