RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 TCHHL1Q5QJ38 904 aaPredicted RBP18.31■□□□□ 0.52
UPF1-209ENST00000600310 FAM219BQ5XKK7 198 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 CCDC81Q6ZN84 652 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 CUZD1Q86UP6 607 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 PPP1R14CQ8TAE6 165 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 STT3BQ8TCJ2 826 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 STARD8Q92502 1023 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 FAR2Q96K12 515 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 KCNC2Q96PR1 638 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 KCNA7Q96RP8 456 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 SERPINI1Q99574 410 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 PAIP2Q9BPZ3 127 aaKnown RBP18.31■□□□□ 0.52
UPF1-209ENST00000600310 CENPKQ9BS16 269 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 TBCDQ9BTW9 1192 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 SHCBP1LQ9BZQ2 653 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 TGIF2Q9GZN2 237 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 BRF2Q9HAW0 419 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 EML4Q9HC35 981 aaKnown RBP18.31■□□□□ 0.52
UPF1-209ENST00000600310 TNFRSF12AQ9NP84 129 aa18.31■□□□□ 0.52
UPF1-209ENST00000600310 FARSBQ9NSD9 589 aaKnown RBP18.31■□□□□ 0.52
UPF1-209ENST00000600310 MRPS18BQ9Y676 258 aaKnown RBP18.31■□□□□ 0.52
UPF1-209ENST00000600310 A0A0G2JN53 185 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 ZNF891A8MT65 544 aaPredicted RBP18.3■□□□□ 0.52
UPF1-209ENST00000600310 DNAJB6O75190 326 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 SH3BGRLO75368 114 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 ULK1O75385 1050 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 CRCPO75575 148 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 CREG1O75629 220 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 SEMA3DO95025 777 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 ETHE1O95571 254 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 FGF4P08620 206 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 HSD3B1P14060 373 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 HSD3B2P26439 372 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 MTTPP55157 894 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 TMPRSS3P57727 454 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 RPS18P62269 152 aaKnown RBP18.3■□□□□ 0.52
UPF1-209ENST00000600310 OCA2Q04671 838 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 OR5T3Q8NGG3 340 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 OR2Y1Q8NGV0 311 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 OR51Q1Q8NH59 317 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 MGARPQ8TDB4 240 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 RGMAQ96B86 450 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 SERINC2Q96SA4 455 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 SPSB2Q99619 263 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 YIPF2Q9BWQ6 316 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 NPLQ9BXD5 320 aaPredicted RBP18.3■□□□□ 0.52
UPF1-209ENST00000600310 ROGDIQ9GZN7 287 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 HCN3Q9P1Z3 774 aa18.3■□□□□ 0.52
UPF1-209ENST00000600310 RALYQ9UKM9 306 aaKnown RBP18.3■□□□□ 0.52
UPF1-209ENST00000600310 PTRH2Q9Y3E5 179 aaKnown RBP18.3■□□□□ 0.52
UPF1-209ENST00000600310 SERTM1A2A2V5 107 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 TMEM114B3SHH9 223 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 K7ENP7 123 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 SAP18O00422 153 aaKnown RBP18.29■□□□□ 0.52
UPF1-209ENST00000600310 ATP8B1O43520 1251 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 CHST10O43529 356 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 SCELO95171 688 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 ZGLP1P0C6A0 271 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 UROSP10746 265 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 NEFHP12036 1026 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 BGNP21810 368 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 IL10P22301 178 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 GRK2P25098 689 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 ARRB2P32121 409 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 TSFMP43897 325 aaKnown RBP18.29■□□□□ 0.52
UPF1-209ENST00000600310 HTR6P50406 440 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 OLR1P78380 273 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 MC1RQ01726 317 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 VAC14Q08AM6 782 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 CRTC2Q53ET0 693 aaPredicted RBP18.29■□□□□ 0.52
UPF1-209ENST00000600310 VWA2Q5GFL6 755 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 CES4AQ5XG92 561 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 INO80CQ6PI98 192 aaPredicted RBP18.29■□□□□ 0.52
UPF1-209ENST00000600310 ATG14Q6ZNE5 492 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 ZC3H7AQ8IWR0 971 aaKnown RBP18.29■□□□□ 0.52
UPF1-209ENST00000600310 HOMEZQ8IX15 550 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 ZSCAN1Q8NBB4 408 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 MIEF2Q96C03 454 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 C14orf105Q9NVL8 296 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 FAM208BQ5VWN6 2430 aa18.29■□□□□ 0.52
UPF1-209ENST00000600310 DMXL2Q8TDJ6 3036 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 RTCAO00442 366 aaKnown RBP18.28■□□□□ 0.52
UPF1-209ENST00000600310 PLPP1O14494 284 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 AZIN1O14977 448 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 NKX2-8O15522 239 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 B3GALT2O43825 422 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 BMP10O95393 424 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 HIST1H1TP22492 207 aaPredicted RBP18.28■□□□□ 0.52
UPF1-209ENST00000600310 ATP5A1P25705 553 aaKnown RBP18.28■□□□□ 0.52
UPF1-209ENST00000600310 SERPINB3P29508 390 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 FOLR3P41439 243 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 XCR1P46094 333 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 RAP1GDS1P52306 607 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 FOXL2P58012 376 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 CSTF3Q12996 717 aaKnown RBP18.28■□□□□ 0.52
UPF1-209ENST00000600310 RUNX2Q13950 521 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 SSPNQ14714 243 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 AP5B1Q2VPB7 878 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 FAM69BQ5VUD6 431 aa18.28■□□□□ 0.52
UPF1-209ENST00000600310 OR4C11Q6IEV9 310 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms