RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 REPS1Q96D71 796 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 COQ10AQ96MF6 247 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 REEP4Q9H6H4 257 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 MARCH7Q9H992 704 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 IL1RAPQ9NPH3 570 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 ITM2CQ9NQX7 267 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 ASIC5Q9NY37 505 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMEFF2Q9UIK5 374 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAM32AQ9Y421 112 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 ABCB7O75027 752 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 KAT7O95251 611 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 HNRNPA1P09651 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 NPTX1Q15818 432 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 ANXA8L1Q5VT79 327 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 METTL2BQ6P1Q9 378 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 USP51Q70EK9 711 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 OR9Q2Q8NGE9 314 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 WFIKKN2Q8TEU8 576 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 RORBQ92753 470 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 UCN3Q969E3 161 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 RPP25Q9BUL9 199 aaKnown RBP11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 EFCAB11Q9BUY7 163 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 ABCB10Q9NRK6 738 aa11.05□□□□□ -0.64
ARHGEF1-220ENST00000600274 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 WDR87Q6ZQQ6 2873 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 SYNDIG1LA6NDD5 238 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 C8orf89P0DMQ9 161 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 PTNP21246 168 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 GZMMP51124 257 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 MADCAM1Q13477 382 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 KCNC3Q14003 757 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 SMU1Q2TAY7 513 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 TAMM41Q96BW9 452 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 ASB16Q96NS5 453 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 C17orf62Q9BQA9 187 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZDHHC5Q9C0B5 715 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 RAD21L1Q9H4I0 556 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 C8orf4Q9NR00 106 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMEM45AQ9NWC5 275 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 SCN3BQ9NY72 215 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZNF639Q9UID6 485 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 CBFA2T3O75081 653 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 BCHEP06276 602 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 DNAJA1P31689 397 aaKnown RBP11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 CDK5R2Q13319 367 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 PDGFRLQ15198 375 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 GCNT6Q5T4J0 391 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 IRAK1BP1Q5VVH5 260 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMEM236Q5W0B7 351 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 SERPINA11Q86U17 422 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 RBM12BQ8IXT5 1001 aaKnown RBP11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 LRIG1Q96JA1 1093 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 FEVQ99581 238 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 PRSS16Q9NQE7 514 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 ATAD3AQ9NVI7 634 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 RLIMQ9NVW2 624 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 PAK1IP1Q9NWT1 392 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 DKK3Q9UBP4 350 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 CA5BQ9Y2D0 317 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3DA0A087WVF3 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3IA0A087WXS9 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3EA0A087X179 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3KA0A087X1G2 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3FA6NER0 549 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3LB9A6J9 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 PI15O43692 258 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3HP0C7X1 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 RELAQ04206 551 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SGCGQ13326 291 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 FXNQ16595 210 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 WSCD2Q2TBF2 565 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3GQ6DHY5 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3CQ6IPX1 549 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 NEK10Q6ZWH5 1172 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 DSG4Q86SJ6 1040 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 LRRTM4Q86VH4 590 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TBC1D3Q8IZP1 549 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 OR8J2Q8NGG1 315 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 PSMA8Q8TAA3 256 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 ZFP90Q8TF47 636 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CHTF18Q8WVB6 975 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 XAGE5Q8WWM1 108 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 VPS35Q96QK1 796 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 FUNDC2Q9BWH2 189 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 RERGLQ9H628 205 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TM9SF3Q9HD45 589 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 TMEM184CQ9NVA4 438 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 AP3M1Q9Y2T2 418 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 CORINQ9Y5Q5 1042 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 SCN8AQ9UQD0 1980 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 FUOMA2VDF0 154 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 FUCA1P04066 466 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 C7P10643 843 aa11.03□□□□□ -0.64
ARHGEF1-220ENST00000600274 GPX2P18283 190 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms