RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 AKIRIN1Q9H9L7 192 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 LRTM1Q9HBL6 345 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 ANKHQ9HCJ1 492 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 TXLNGQ9NUQ3 528 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 FGFR1OP2Q9NVK5 253 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 RIC8BQ9NVN3 520 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 C1orf109Q9NX04 203 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 AHSPQ9NZD4 102 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 ADAM29Q9UKF5 820 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 CDC14AQ9UNH5 594 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 NAALAD2Q9Y3Q0 740 aa11.99□□□□□ -0.49
CHMP2A-206ENST00000600118 MDC1Q14676 2089 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 A0A088AWK7 358 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 A0A0A6YYD5 115 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ATP6AP2A0A1C7CYW4 349 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 TRPC5OSA6NMA1 111 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 SGK494L7N484 410 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 DNAJB6O75190 326 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 RDH16O75452 317 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 EEDO75530 441 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ATP6AP2O75787 350 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 VIMP08670 466 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF10P21506 573 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ALAS2P22557 587 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 TPP2P29144 1249 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 SSR2P43308 183 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 OR1D4P47884 311 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 AVPR1BP47901 424 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 RAP1GDS1P52306 607 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 SKP1P63208 163 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 RAE1P78406 368 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 DCDP81605 110 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ABHD18Q0P651 414 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 NR6A1Q15406 480 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 NKAIN1Q4KMZ8 207 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 SPIN4Q56A73 249 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 C6orf136Q5SQH8 315 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 VWA5B1Q5TIE3 1220 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 C1orf189Q5VU69 101 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 MRM1Q6IN84 353 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 EPGNQ6UW88 154 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 LARP4Q71RC2 724 aaKnown RBP eCLIP11.98□□□□□ -0.495e-6■■■■□ 22.6
CHMP2A-206ENST00000600118 COX15Q7KZN9 410 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 NUDT13Q86X67 352 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ZFAND4Q86XD8 727 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 METTL27Q8N6F8 245 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 C1orf52Q8N6N3 182 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ACOT4Q8N9L9 421 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 GALNT6Q8NCL4 622 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 STON2Q8WXE9 905 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 CLIP3Q96DZ5 547 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 CHMP6Q96FZ7 201 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 SERINC2Q96SA4 455 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 DPH2Q9BQC3 489 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 NPLQ9BXD5 320 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC7A5P2Q9GIP4 190 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 AKTIPQ9H8T0 292 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 PRM3Q9NNZ6 103 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 THSD1Q9NS62 852 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 NDOR1Q9UHB4 597 aa11.98□□□□□ -0.49
CHMP2A-206ENST00000600118 IGLV3-12A0A075B6K2 115 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 TEX51A0A1B0GUA7 166 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF860A6NHJ4 632 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 B3GALT2O43825 422 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 TMPRSS11DO60235 418 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 VPS4BO75351 444 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 KLK1P06870 262 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ACPPP15309 386 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 CERS1P27544 350 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 IDH3AP50213 366 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SEC24CP53992 1094 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 GNGT1P63211 74 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ACSM2AQ08AH3 577 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 RUNX2Q13950 521 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SMU1Q2TAY7 513 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 TBC1D25Q3MII6 688 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 TUBB8Q3ZCM7 444 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC9B1Q4ZJI4 515 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 RFTN2Q52LD8 501 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SPDYAQ5MJ70 313 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ACSM2BQ68CK6 577 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 LCN10Q6JVE6 187 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 FAM198BQ6UWH4 519 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 C6orf15Q6UXA7 325 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 MED25Q71SY5 747 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 PAGE2Q7Z2X7 111 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SHISA5Q8N114 240 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 OR5T3Q8NGG3 340 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ACTRT2Q8TDY3 377 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 TUBGCP3Q96CW5 907 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 MMABQ96EY8 250 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF578Q96N58 590 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 SIKE1Q9BRV8 207 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 KCNK13Q9HB14 408 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF304Q9HCX3 659 aa11.97□□□□□ -0.49
CHMP2A-206ENST00000600118 KCMF1Q9P0J7 381 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms