RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	EGFL8	Q99944	293 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	DEFB126	Q9BYW3	111 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	TRIM45	Q9H8W5	580 aa	Predicted RBP	9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	GPAM	Q9HCL2	828 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	ASB1	Q9Y576	335 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	TEX264	Q9Y6I9	313 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	KCNE2	Q9Y6J6	123 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	POLQ	O75417	2590 aa		9.84	□□□□□ -0.83
LSM4-205	ENST00000597776	FAM95C	A0A1B0GW59	222 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	URAD	A6NGE7	173 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	CES2	O00748	559 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	FCHO1	O14526	889 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	TFEC	O14948	347 aa	Predicted RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	PIAS1	O75925	651 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	WDR47	O94967	919 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	SERPINA6	P08185	405 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	HNRNPH1	P31943	449 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	GDF5	P43026	501 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	HNRNPF	P52597	415 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	TAS2R39	P59534	338 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	KRTAP10-9	P60411	292 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	GPR85	P60893	370 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	FASTKD3	Q14CZ7	662 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	MORF4L2	Q15014	288 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	TSN	Q15631	228 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	C16orf47	Q6ZP98	133 aa	Predicted RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	ZC3HC1	Q86WB0	502 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	SULF2	Q8IWU5	870 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	KLHL7	Q8IXQ5	586 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	APCDD1L	Q8NCL9	501 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	TMEM52	Q8NDY8	209 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	ARMC2	Q8NEN0	867 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	B3GNT7	Q8NFL0	401 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	ANKRD49	Q8WVL7	239 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	SREK1	Q8WXA9	508 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	CAPZA3	Q96KX2	299 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	DMRTA2	Q96SC8	542 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	CLK4	Q9HAZ1	481 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	PNO1	Q9NRX1	252 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	TRMT1	Q9NXH9	659 aa	Known RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	ZNF223	Q9UK11	482 aa	Predicted RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	ITGB1BP2	Q9UKP3	347 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	FBXW2	Q9UKT8	454 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	PPT2	Q9UMR5	302 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	KLF13	Q9Y2Y9	288 aa	Predicted RBP	9.83	□□□□□ -0.84
LSM4-205	ENST00000597776	OARD1	Q9Y530	152 aa		9.83	□□□□□ -0.84
LSM4-205	ENST00000597776		A0A1B0GTH9	108 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	NCF1B	A6NI72	391 aa	Predicted RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	NCF1C	A8MVU1	366 aa	Predicted RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776		E9PLN8	166 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	PRRG2	O14669	202 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	ERI3	O43414	337 aa	Known RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	PEX1	O43933	1283 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	HS6ST1	O60243	411 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	PRKN	O60260	465 aa	Predicted RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CDC40	O60508	579 aa	Known RBP eCLIP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	ITGA10	O75578	1167 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	C1GALT1C1L	P0DN25	315 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	NCF1	P14598	390 aa	Predicted RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	NR0B1	P51843	470 aa	Known RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	STXBP1	P61764	594 aa	Known RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	MGAT5	Q09328	741 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	RUNX2	Q13950	521 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	SLBP	Q14493	270 aa	Known RBP eCLIP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	ADNP2	Q6IQ32	1131 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	SLCO4C1	Q6ZQN7	724 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	FRA10AC1	Q70Z53	315 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	MDGA2	Q7Z553	956 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CD163	Q86VB7	1156 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CEP97	Q8IW35	865 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	SCUBE1	Q8IWY4	988 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CYP4Z2P	Q8N1L4	340 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	ARMC10	Q8N2F6	343 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	NKAP	Q8N5F7	415 aa	Known RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	FAM47B	Q8NA70	645 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	PHF10	Q8WUB8	498 aa	Known RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CCT6B	Q92526	530 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	GAL3ST3	Q96A11	431 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	SDCCAG3	Q96C92	435 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	MS4A6E	Q96DS6	147 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	VKORC1	Q9BQB6	163 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	TRIM31	Q9BZY9	425 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	LIN28A	Q9H9Z2	209 aa	Known RBP	9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	MMACHC	Q9Y4U1	282 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CLDN16	Q9Y5I7	305 aa		9.82	□□□□□ -0.84
LSM4-205	ENST00000597776	CACNA1C	Q13936	2221 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	MYOCOS	A0A1B0GUC4	107 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	LRIT2	A6NDA9	550 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	CDK2AP1	O14519	115 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	TP73	O15350	636 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	PDE9A	O76083	593 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	SEC31A	O94979	1220 aa	Known RBP	9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	TBX6	O95947	436 aa	Predicted RBP	9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	TPO	P07202	933 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	GNAZ	P19086	355 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	SSTR2	P30874	369 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	PTGS2	P35354	604 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	SLC6A12	P48065	614 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	HNMT	P50135	292 aa		9.81	□□□□□ -0.84
LSM4-205	ENST00000597776	CLCN2	P51788	898 aa		9.81	□□□□□ -0.84

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