RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RIC8BQ9NVN3 520 aa15.76■□□□□ 0.11
SSBP4-204ENST00000597724 C19orf25Q9UFG5 118 aaPredicted RBP15.76■□□□□ 0.11
SSBP4-204ENST00000597724 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSBP4-204ENST00000597724 ADGRE2Q9UHX3 823 aa15.76■□□□□ 0.11
SSBP4-204ENST00000597724 RNF11Q9Y3C5 154 aa15.76■□□□□ 0.11
SSBP4-204ENST00000597724 TSC22D4Q9Y3Q8 395 aa15.76■□□□□ 0.11
SSBP4-204ENST00000597724 V9GYY5 206 aaPredicted RBP15.76■□□□□ 0.11
SSBP4-204ENST00000597724 SCN2AQ99250 2005 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 A0A088AWK7 358 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 A8MT66 165 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 MAGEB17A8MXT2 336 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 FOXO6A8MYZ6 492 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 FAM227AF5H4B4 570 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 H0YIV9 168 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 OR7A17O14581 309 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 DPM1O60762 260 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 B4GALT2O60909 372 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 CDC123O75794 336 aaPredicted RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 CLDN9O95484 217 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 TGFB1P01137 390 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 ALPPP05187 535 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 ZNF10P21506 573 aaPredicted RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 JAK1P23458 1154 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 CASRP41180 1078 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 PIK3CBP42338 1070 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 SLCO1A2P46721 670 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 RUNX2Q13950 521 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 NSDHLQ15738 373 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 COLEC12Q5KU26 742 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 IRAK1BP1Q5VVH5 260 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 IGFL3Q6UXB1 125 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 SH2D5Q6ZV89 423 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 CHSY3Q70JA7 882 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 UBE3DQ7Z6J8 389 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 ANKRD37Q7Z713 158 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 MYLK4Q86YV6 388 aaPredicted RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 KBTBD2Q8IY47 623 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 CYP4X1Q8N118 509 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 SRFBP1Q8NEF9 429 aaKnown RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 HUS1BQ8NHY5 278 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 AENQ8WTP8 325 aaKnown RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 THOC3Q96J01 351 aaKnown RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 IMMP1LQ96LU5 166 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 NSUN5Q96P11 429 aaKnown RBP15.75■□□□□ 0.11
SSBP4-204ENST00000597724 SERINC2Q96SA4 455 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 TUBB6Q9BUF5 446 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 NTMT1Q9BV86 223 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 C1QTNF3Q9BXJ4 246 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 PRDM7Q9NQW5 492 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 PCDHGA11Q9Y5H2 935 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 TENM4Q6N022 2769 aa15.75■□□□□ 0.11
SSBP4-204ENST00000597724 IGHV3-20A0A0C4DH32 117 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 PSMD12O00232 456 aaPredicted RBP15.74■□□□□ 0.11
SSBP4-204ENST00000597724 B3GALT2O43825 422 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 PRMT3O60678 531 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 CDH16O75309 829 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 SERPINA7P05543 415 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 RPS17P08708 135 aaKnown RBP15.74■□□□□ 0.11
SSBP4-204ENST00000597724 PRR35P0CG20 571 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 ICAM2P13598 275 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 TAC1P20366 129 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 MTTPP55157 894 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 TGM3Q08188 693 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 ABRAXAS2Q15018 415 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 CPSF6Q16630 551 aaKnown RBP eCLIP15.74■□□□□ 0.11
SSBP4-204ENST00000597724 ERCC6LQ2NKX8 1250 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 NADK2Q4G0N4 442 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 TMEM35AQ53FP2 167 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 DEPDC1Q5TB30 811 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 AGAP7PQ5VUJ5 663 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 EMBQ6PCB8 327 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 RIPOR1Q6ZS17 1223 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 RNF175Q8N4F7 328 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 OR52B6Q8NGF0 335 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 EPS8L3Q8TE67 593 aaKnown RBP15.74■□□□□ 0.11
SSBP4-204ENST00000597724 PSMF1Q92530 271 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 ATP6V1E2Q96A05 226 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 CMTM7Q96FZ5 175 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 PTCHD1Q96NR3 888 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 AGAP4Q96P64 663 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 KCNC2Q96PR1 638 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 WDR77Q9BQA1 342 aaPredicted RBP15.74■□□□□ 0.11
SSBP4-204ENST00000597724 TBCDQ9BTW9 1192 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 ZBTB20Q9HC78 741 aaPredicted RBP15.74■□□□□ 0.11
SSBP4-204ENST00000597724 DCDC2Q9UHG0 476 aa15.74■□□□□ 0.11
SSBP4-204ENST00000597724 SMIM23A6NLE4 172 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 DLX3O60479 287 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 SH3BGRLO75368 114 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 SEC24DO94855 1032 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 NUDT17P0C025 328 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 KRT15P19012 456 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 CERS1P27544 350 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 CCNG1P51959 295 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 RAB38P57729 211 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 BTG2P78543 158 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 TRAF3Q13114 568 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 DDX39BQ13838 428 aaKnown RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 ZRSR2Q15696 482 aaKnown RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 KHDRBS2Q5VWX1 349 aaKnown RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 IGFL2Q6UWQ7 119 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms