RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 LY6G6DO95868 133 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 RNH1P13489 461 aaKnown RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 OGNP20774 298 aaKnown RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 CCND1P24385 295 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 TACR1P25103 407 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 NMBRP28336 390 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 MAGEA5P43359 124 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 MAN2A2P49641 1150 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 ASCL1P50553 236 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 BTG2P78543 158 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 CUL1Q13616 776 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 HSPB2Q16082 182 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 FBXL19-AS1Q494R0 122 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 UBE2R2Q712K3 238 aaPredicted RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 CCDC170Q8IYT3 715 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 TBC1D19Q8N5T2 526 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 UBL4BQ8N7F7 174 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 PRELID2Q8N945 189 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 ASB15Q8WXK1 588 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 ATG4AQ8WYN0 398 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 COX4I2Q96KJ9 171 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 SH3GL2Q99962 352 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 FAM173AQ9BQD7 235 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 IL1RL2Q9HB29 575 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 EIF2B3Q9NR50 452 aaKnown RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 BFARQ9NZS9 450 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 SAMD15Q9P1V8 674 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 MTRF1LQ9UGC7 380 aaKnown RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 PPIEQ9UNP9 301 aaKnown RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 SH2B3Q9UQQ2 575 aa9.41□□□□□ -0.9
TRIM28-210ENST00000597618 DRG1Q9Y295 367 aaKnown RBP9.41□□□□□ -0.9
TRIM28-210ENST00000597618 TCRBV7S2A1N4TA0A589 114 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 TUBAL3A6NHL2 446 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 A8MUA0 341 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 GOLGA8KD6RF30 607 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 GOLGA8TH3BQL2 631 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 ARHGEF9O43307 516 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 HCN1O60741 890 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 DNAJB6O75190 326 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 AVILO75366 819 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 OR2J2O76002 312 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 ZFAND5O76080 213 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 OR6B1O95007 311 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 ZNF888P0CJ79 500 aaPredicted RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 EPXP11678 715 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 CDH1P12830 882 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 BMP5P22003 454 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 PCSK6P29122 969 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 NPY2RP49146 381 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 CCR8P51685 355 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 NKX6-1P78426 367 aaPredicted RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 RGS1Q08116 209 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 HYAL2Q12891 473 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 OASLQ15646 514 aaKnown RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 IL20RBQ6UXL0 311 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 STRA8Q7Z7C7 330 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 SLC13A5Q86YT5 568 aaPredicted RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 CILP2Q8IUL8 1156 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 TMEM251Q8N6I4 163 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 CCDC89Q8N998 374 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 LRRC57Q8N9N7 239 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 KCNJ9Q92806 393 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 NCLNQ969V3 563 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 MFSD3Q96ES6 412 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 KIFC1Q9BW19 673 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 FRMD8P1Q9BZ68 369 aaPredicted RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 LDAHQ9H6V9 325 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 PLEKHF2Q9H8W4 249 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 NECTIN3Q9NQS3 549 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 INTS10Q9NVR2 710 aaKnown RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 ALKBH4Q9NXW9 302 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 PAK5Q9P286 719 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 ZNF223Q9UK11 482 aaPredicted RBP9.4□□□□□ -0.9
TRIM28-210ENST00000597618 MMACHCQ9Y4U1 282 aa9.4□□□□□ -0.9
TRIM28-210ENST00000597618 SCN3AQ9NY46 2000 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 TRBC2A0A5B9 178 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 URADA6NGE7 173 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 BTNL10A8MVZ5 291 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 MIF4GDA9UHW6 222 aaKnown RBP9.39□□□□□ -0.91
TRIM28-210ENST00000597618 G3V3Y1 287 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 OR1F1O43749 312 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 LIASO43766 372 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 ATP6AP2O75787 350 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 B3GALT4O96024 378 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 SERPIND1P05546 499 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 CD53P19397 219 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 CNR1P21554 472 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 CYLC1P35663 651 aaPredicted RBP9.39□□□□□ -0.91
TRIM28-210ENST00000597618 PPP2R2BQ00005 443 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 SLC10A1Q14973 349 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 HYAL4Q2M3T9 481 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 HECTD2Q5U5R9 776 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 KIAA0930Q6ICG6 404 aaPredicted RBP9.39□□□□□ -0.91
TRIM28-210ENST00000597618 LCTLQ6UWM7 567 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 RTL4Q6ZR62 310 aa9.39□□□□□ -0.91
TRIM28-210ENST00000597618 CENPUQ71F23 418 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms