RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 RILPQ96NA2 401 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 SERPINI1Q99574 410 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 CENPKQ9BS16 269 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 SARGQ9BW04 601 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 TMEM120AQ9BXJ8 343 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 NLNQ9BYT8 704 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 RHBGQ9H310 441 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 TUBB1Q9H4B7 451 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 BRF2Q9HAW0 419 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 FANCEQ9HB96 536 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 IRAK4Q9NWZ3 460 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 ZFP69BQ9UJL9 534 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 SLC12A4Q9UP95 1085 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 PTGDR2Q9Y5Y4 395 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 AP1M2Q9Y6Q5 423 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 ABCA2Q9BZC7 2435 aa11.48□□□□□ -0.57
SHKBP1-213ENST00000597325 SDK2Q58EX2 2172 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ESPL1Q14674 2120 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 IGHV5-10-1A0A0J9YXX1 117 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 A8MU76 341 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 MAGEB17A8MXT2 336 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 SDHDO14521 159 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 SNX3O60493 162 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 CTSVO60911 334 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 CLEC3AO75596 197 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 RSL1D1O76021 490 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 DDAH2O95865 285 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 SEPHS1P49903 392 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 RAP1GDS1P52306 607 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 RPS13P62277 151 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ZIC1Q15915 447 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 DEFB110Q30KQ9 67 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ATP6AP1LQ52LC2 224 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 XKR7Q5GH72 579 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 SPDYAQ5MJ70 313 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 VWA5B1Q5TIE3 1220 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 FAM219BQ5XKK7 198 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 EPGNQ6UW88 154 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 MAVSQ7Z434 540 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 TRIM46Q7Z4K8 759 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ASPGQ86U10 573 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ZFAND4Q86XD8 727 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ANKRD53Q8N9V6 530 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ZNF473Q8WTR7 871 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 CMTM7Q96FZ5 175 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 PPP3R2Q96LZ3 170 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 TMEM74Q96NL1 305 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 ACPTQ9BZG2 426 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 TCF7L2Q9NQB0 619 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 PILRAQ9UKJ1 303 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
SHKBP1-213ENST00000597325 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ATP6AP2A0A1C7CYW4 349 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 SERTM1A2A2V5 107 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 URADA6NGE7 173 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 H0YGG7 62 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 TXNDC9O14530 226 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ZNF195O14628 629 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 LCMT2O60294 686 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 PRAMEF10O60809 474 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ATP6AP2O75787 350 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 EIF2S1P05198 315 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 NELFEP18615 380 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 PTX3P26022 381 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 EPHA3P29320 983 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 IDH3AP50213 366 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ARF3P61204 181 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 STXBP1P61764 594 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 HMGCS1Q01581 520 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 TGM3Q08188 693 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 KLRB1Q12918 225 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 TRA2AQ13595 282 aaKnown RBP eCLIP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 PWP1Q13610 501 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 GALNTL6Q49A17 601 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 SLC9B1Q4ZJI4 515 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ADNP2Q6IQ32 1131 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 CYB5D1Q6P9G0 228 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 CHSY3Q70JA7 882 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 MCATQ8IVS2 390 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 RNF175Q8N4F7 328 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 CSNK1A1LQ8N752 337 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ANKS4BQ8N8V4 417 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 CAMKVQ8NCB2 501 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 GALNT11Q8NCW6 608 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 CEP70Q8NHQ1 597 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 ACTRT2Q8TDY3 377 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 C10orf82Q8WW14 230 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 SLC13A3Q8WWT9 602 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 STON2Q8WXE9 905 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 KLHL6Q8WZ60 621 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 SLC41A2Q96JW4 573 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 C3orf30Q96M34 536 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 FCRL4Q96PJ5 515 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 OR2A5Q96R48 311 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
SHKBP1-213ENST00000597325 MS4A8Q9BY19 250 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms