RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FAM46DQ8NEK8 389 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 OR56A3Q8NH54 315 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 LILRB4Q8NHJ6 448 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 FIBINQ8TAL6 211 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.7□□□□□ -0.38
VRK3-209ENST00000594948 OR5M11Q96RB7 305 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 FAM129BQ96TA1 746 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 MTERF1Q99551 399 aaKnown RBP12.7□□□□□ -0.38
VRK3-209ENST00000594948 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 GPATCH2Q9NW75 528 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 KCND3Q9UK17 655 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 TBC1D24Q9ULP9 559 aa12.7□□□□□ -0.38
VRK3-209ENST00000594948 CAB39Q9Y376 341 aaPredicted RBP12.7□□□□□ -0.38
VRK3-209ENST00000594948 A8MU76 341 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ARHGEF33A8MVX0 844 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 A8MX80 341 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 GPR37L1O60883 481 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 GPX5O75715 221 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 GADD45GO95257 159 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 HSMCR30P0CW71 290 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ARAFP10398 606 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ETFAP13804 333 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 TNFSF8P32971 234 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 CSTF2P33240 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
VRK3-209ENST00000594948 FLT3LGP49771 235 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 DCDC1P59894 354 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ZXDBP98169 803 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ZNF763Q0D2J5 394 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 DDX39BQ13838 428 aaKnown RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 DMC1Q14565 340 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 MED22Q15528 200 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SSX1Q16384 188 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 MPPE1Q53F39 396 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 FRMPD2BQ6IN97 320 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 NFKBIDQ8NI38 313 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ELMO1Q92556 727 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 TIFAQ96CG3 184 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 MTERF3Q96E29 417 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 OPALINQ96PE5 141 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SLC35A5Q9BS91 424 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 STOX2Q9P2F5 926 aaPredicted RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 NFKBIL1Q9UBC1 381 aaPredicted RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 HCSTQ9UBK5 93 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 LSM7Q9UK45 103 aaKnown RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 EXO1Q9UQ84 846 aaKnown RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 ANGPT4Q9Y264 503 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 LSM2Q9Y333 95 aaKnown RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 FADS2P1A8MWK0 482 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 UPK3BL1B0FP48 263 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 UPK3BL2E5RIL1 263 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ETHE1O95571 254 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 KRT75O95678 551 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ADAP00813 363 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 OPN1SWP03999 348 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 CATP04040 527 aaKnown RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 DNTTP04053 509 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SRCP12931 536 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SELPP16109 830 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 CRISP3P54108 245 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 CDK6Q00534 326 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 CRHR2Q13324 411 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 NCF4Q15080 339 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 BCL7AQ4VC05 210 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ZNF385BQ569K4 471 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 COX20Q5RI15 118 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ATAD3CQ5T2N8 411 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 UNC5DQ6UXZ4 953 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 PTCHD4Q6ZW05 846 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 TMEM150AQ86TG1 271 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SIMC1Q8NDZ2 872 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 OR7G3Q8NG95 312 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 OR9Q2Q8NGE9 314 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 WDR36Q8NI36 951 aaKnown RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 WDR34Q96EX3 536 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 TCF25Q9BQ70 676 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 ASPNQ9BXN1 380 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 GPBP1L1Q9HC44 474 aaPredicted RBP12.69□□□□□ -0.38
VRK3-209ENST00000594948 HHATLQ9HCP6 504 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 PRDM8Q9NQV8 689 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 SH3BP4Q9P0V3 963 aa12.69□□□□□ -0.38
VRK3-209ENST00000594948 DOCK6Q96HP0 2047 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 IQCMA0A1B0GVH7 501 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 HMX3A6NHT5 357 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 CACNB4O00305 520 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 FOXE1O00358 373 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 CTDSP2O14595 271 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 PCDH17O14917 1159 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 SGTAO43765 313 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 SCO2O43819 266 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 ZNF30P17039 623 aa12.68□□□□□ -0.38
VRK3-209ENST00000594948 ZNF8P17098 575 aaPredicted RBP12.68□□□□□ -0.38
VRK3-209ENST00000594948 RPL17P18621 184 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms