RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 JAK1P23458 1154 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 CNTFP26441 200 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 PLA2G16P53816 162 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 ALDH18A1P54886 795 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 PCBP2Q15366 365 aaKnown RBP eCLIP17.38■□□□□ 0.376e-9■■■■■ 40.7
SHKBP1-202ENST00000593764 SFT2D3Q587I9 215 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 PAGE2BQ5JRK9 111 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 B3GNTL1Q67FW5 361 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 ABHD17CQ6PCB6 329 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 LAS2Q8IYD9 372 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 TEX9Q8N6V9 391 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 CATSPER1Q8NEC5 780 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 OR2L5Q8NG80 312 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 DNAJB14Q8TBM8 379 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 SNRNP40Q96DI7 357 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 F2RL3Q96RI0 385 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 ILKAPQ9H0C8 392 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 EPB41L4BQ9H329 900 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 EPS8L2Q9H6S3 715 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 L2HGDHQ9H9P8 463 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 PCDHGA10Q9Y5H3 936 aa17.38■□□□□ 0.37
SHKBP1-202ENST00000593764 IGKV3D-11A0A0A0MRZ8 115 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 EXOC1LA0A1B0GW35 172 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 PRMT3O60678 531 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 EPB42P16452 691 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 HIST2H2ACQ16777 129 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 BTBD16Q32M84 506 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 HIST2H2AA3Q6FI13 130 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 H3F3CQ6NXT2 135 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 QSOX2Q6ZRP7 698 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 TAOK1Q7L7X3 1001 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 UBE3DQ7Z6J8 389 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 IQCKQ8N0W5 287 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 CISD2Q8N5K1 135 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 EFCAB3Q8N7B9 438 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 OR7G3Q8NG95 312 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 ZNF473Q8WTR7 871 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 FAR2Q96K12 515 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 PTCHD1Q96NR3 888 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 NPLQ9BXD5 320 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 PRDM7Q9NQW5 492 aa17.37■□□□□ 0.37
SHKBP1-202ENST00000593764 SIX3O95343 332 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 SNRPAP09012 282 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 RBP1P09455 135 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 COL6A2P12110 1019 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 MAOAP21397 527 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 OR4D2P58180 307 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 AP2B1P63010 937 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 ACTN3Q08043 901 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 GRHL2Q6ISB3 625 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 MED27Q6P2C8 311 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 PAPD4Q6PIY7 484 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 ADGRD1Q6QNK2 874 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 TMEM151AQ8N4L1 468 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 GALNT11Q8NCW6 608 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 M1APQ8TC57 530 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 HAS2Q92819 552 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 BARD1Q99728 777 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 MS4A8Q9BY19 250 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 NECTIN3Q9NQS3 549 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 ASF1BQ9NVP2 202 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 PLA2G3Q9NZ20 509 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 CPSF2Q9P2I0 782 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 NTNG1Q9Y2I2 539 aa17.36■□□□□ 0.37
SHKBP1-202ENST00000593764 ESPL1Q14674 2120 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 TCRBV16S1A1N1A0A5B0 115 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 CLEC18AA5D8T8 446 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 PSMD12O00232 456 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 E2F3O00716 465 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 MYBL2P10244 700 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 HPDP32754 393 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 UQCRFS1P47985 274 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 SRSF1Q07955 248 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 GTF2H2Q13888 395 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 SLC29A2Q14542 456 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 ZNF169Q14929 603 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 EXT1Q16394 746 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 TSNAXIP1Q2TAA8 658 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 GTF2H2CQ6P1K8 395 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 METTL2BQ6P1Q9 378 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 TRIM40Q6P9F5 258 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 CLEC18BQ6UXF7 455 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 TIFABQ6ZNK6 161 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 GOLGA7Q7Z5G4 137 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 ATCAYQ86WG3 371 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 GSPT2Q8IYD1 628 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 CLEC18CQ8NCF0 446 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 TMEM52Q8NDY8 209 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 UBE2E3Q969T4 207 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 CNDP1Q96KN2 507 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 SERINC2Q96SA4 455 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 LPAR4Q99677 370 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 MMP25Q9NPA2 562 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 PRDM9Q9NQV7 894 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 CLDN16Q9Y5I7 305 aa17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 TNPO3Q9Y5L0 923 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-202ENST00000593764 A0A088AWK7 358 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 TCP11X1B4DZS4 312 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 CYR61O00622 381 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 B3GALT2O43825 422 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms