RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 CHSY3Q70JA7 882 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 OR2Y1Q8NGV0 311 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 OR51Q1Q8NH59 317 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 METTL6Q8TCB7 284 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 STT3BQ8TCJ2 826 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 STARD8Q92502 1023 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 CRELD1Q96HD1 420 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 SPSB2Q99619 263 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 TRMOQ9BU70 441 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 YIPF2Q9BWQ6 316 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 SORBS1Q9BX66 1292 aaKnown RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 SHCBP1LQ9BZQ2 653 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 ELOVL6Q9H5J4 265 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 WDR54Q9H977 334 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 MKKSQ9NPJ1 570 aaPredicted RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 ZNF282Q9UDV7 671 aaPredicted RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 SNX6Q9UNH7 406 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 PTRH2Q9Y3E5 179 aaKnown RBP9.41□□□□□ -0.9
TPM4-216ENST00000592822 TIMM22Q9Y584 194 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 NBEAQ8NFP9 2946 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 SCN2AQ99250 2005 aa9.41□□□□□ -0.9
TPM4-216ENST00000592822 NUP210LQ5VU65 1888 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 PCSK5Q92824 1860 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 H3BQF6 201 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 K7ENP7 123 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 RTCAO00442 366 aaKnown RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 CHST10O43529 356 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 RECKO95980 971 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 KRT6AP02538 564 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 KRT6BP04259 564 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 UMODP07911 640 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 CD63P08962 238 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 FURINP09958 794 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ZGLP1P0C6A0 271 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 BGNP21810 368 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 CERS1P27544 350 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SERPINB3P29508 390 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 HMOX2P30519 316 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 FOLR3P41439 243 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 KRT6CP48668 564 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 OCA2Q04671 838 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 TGM3Q08188 693 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 VAC14Q08AM6 782 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 CUL3Q13618 768 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 RUNX2Q13950 521 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 RCN2Q14257 317 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ABRAXAS2Q15018 415 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 CHI3L2Q15782 390 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 UGT8Q16880 541 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ATP1A1-AS1Q5TC04 95 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 HHATQ5VTY9 493 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 TRIM40Q6P9F5 258 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 INO80CQ6PI98 192 aaPredicted RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 ZNF793Q6ZN11 406 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SHISA6Q6ZSJ9 500 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ZC3H7AQ8IWR0 971 aaKnown RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 PRSS58Q8IYP2 241 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 MGARPQ8TDB4 240 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ADAMTS17Q8TE56 1095 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SNRNP27Q8WVK2 155 aaKnown RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 SELENOMQ8WWX9 145 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SREK1Q8WXA9 508 aaKnown RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 RGMAQ96B86 450 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 MIEF2Q96C03 454 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 FAR2Q96K12 515 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 KCNC2Q96PR1 638 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SERINC2Q96SA4 455 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 HBEGFQ99075 208 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SERPINI1Q99574 410 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 TBCDQ9BTW9 1192 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 ZNF717Q9BY31 904 aaPredicted RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 TGIF2Q9GZN2 237 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 SOX17Q9H6I2 414 aaPredicted RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 CLK4Q9HAZ1 481 aaKnown RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 NXT1Q9UKK6 140 aaKnown RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 PADI2Q9Y2J8 665 aa9.4□□□□□ -0.9
TPM4-216ENST00000592822 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
TPM4-216ENST00000592822 ZNF891A8MT65 544 aaPredicted RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 PLPP1O14494 284 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 AZIN1O14977 448 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 ITM2AO43736 263 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 B3GALT2O43825 422 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 ULK1O75385 1050 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 JRKO75564 520 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SCELO95171 688 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 BMP10O95393 424 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SERPINE1P05121 402 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 FGF4P08620 206 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 PRKAR1AP10644 381 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 CHN1P15882 459 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 HIST1H1TP22492 207 aaPredicted RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 ATP5A1P25705 553 aaKnown RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 BSGP35613 385 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SERPINB5P36952 375 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms