RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MEMO1Q9Y316 297 aa17.65■□□□□ 0.42
CCDC43-205ENST00000592333 PSAT1Q9Y617 370 aa17.65■□□□□ 0.42
CCDC43-205ENST00000592333 SAR1BQ9Y6B6 198 aa17.65■□□□□ 0.42
CCDC43-205ENST00000592333 NPIPA5E9PKD4 350 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 FAM227AF5H4B4 570 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 KLRC4-KLRK1H3BQV0 150 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 TP73O15350 636 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 CLEC3AO75596 197 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 PRF1P14222 555 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 ELAVL4P26378 380 aaKnown RBP17.64■□□□□ 0.41
CCDC43-205ENST00000592333 PAFAH1B1P43034 410 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 TAS2R39P59534 338 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 PDIA2Q13087 525 aaKnown RBP17.64■□□□□ 0.41
CCDC43-205ENST00000592333 RCN2Q14257 317 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 MAPKAPK3Q16644 382 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 ADPRMQ3LIE5 342 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 HP1BP3Q5SSJ5 553 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-205ENST00000592333 FRA10AC1Q70Z53 315 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 GDF7Q7Z4P5 450 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-205ENST00000592333 SCUBE1Q8IWY4 988 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 KLHL7Q8IXQ5 586 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 CYP4X1Q8N118 509 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 APCDD1LQ8NCL9 501 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 FBXO36Q8NEA4 188 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 PWWP2AQ96N64 755 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 TRIM51Q9BSJ1 452 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 HES7Q9BYE0 225 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 KLHL31Q9H511 634 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 TRMT1Q9NXH9 659 aaKnown RBP17.64■□□□□ 0.41
CCDC43-205ENST00000592333 NPIPA1Q9UND3 350 aa17.64■□□□□ 0.41
CCDC43-205ENST00000592333 LRIT2A6NDA9 550 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 WDR47O94967 919 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 ZNF24P17028 368 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 TFEBP19484 476 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 MAOAP21397 527 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 PGGT1BP53609 377 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 SLC12A2P55011 1212 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 ADORA2A-AS1P86434 159 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 SRSF11Q05519 484 aaKnown RBP17.63■□□□□ 0.41
CCDC43-205ENST00000592333 TGFBIQ15582 683 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 TOR1AIP1Q5JTV8 583 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 SRRM1Q8IYB3 904 aaKnown RBP17.63■□□□□ 0.41
CCDC43-205ENST00000592333 ZNF595Q8IYB9 648 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 KIF2BQ8N4N8 673 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 MS4A6EQ96DS6 147 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 TSPAN17Q96FV3 270 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 NECTIN3Q9NQS3 549 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 TINAGQ9UJW2 476 aa17.63■□□□□ 0.41
CCDC43-205ENST00000592333 NCOA6Q14686 2063 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-205ENST00000592333 NPEPPSL1A6NEC2 478 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ANKDD1BA6NHY2 528 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 EFCAB8A8MWE9 144 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 E9PLN8 166 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 PRRG2O14669 202 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 EIF3HO15372 352 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCDC43-205ENST00000592333 WISP2O76076 250 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 B3GALT4O96024 378 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ABOP16442 354 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 SAT1P21673 171 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 GRNP28799 593 aaKnown RBP17.62■□□□□ 0.41
CCDC43-205ENST00000592333 HNF4AP41235 474 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 RAB38P57729 211 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ATP6V0D1P61421 351 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 BTN3A2P78410 334 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 TSNQ15631 228 aaKnown RBP17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ZNF468Q5VIY5 522 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ZNF227Q86WZ6 799 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ANKMY2Q8IV38 441 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 GPALPP1Q8IXQ4 340 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 C16orf52Q8NHV5 167 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 ANKRD49Q8WVL7 239 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 CDKL2Q92772 493 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 WDR34Q96EX3 536 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 VMP1Q96GC9 406 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 NAPGQ99747 312 aaPredicted RBP17.62■□□□□ 0.41
CCDC43-205ENST00000592333 VKORC1Q9BQB6 163 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 SH3BGRL2Q9UJC5 107 aa17.62■□□□□ 0.41
CCDC43-205ENST00000592333 CTAGE15A4D2H0 777 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 B3GALT2O43825 422 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 WISP3O95389 354 aaPredicted RBP17.61■□□□□ 0.41
CCDC43-205ENST00000592333 CLDN14O95500 239 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 COX6B1P14854 86 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 GPR143P51810 404 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 TGM3Q08188 693 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 LAPTM5Q13571 262 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 EFTUD2Q15029 972 aaKnown RBP eCLIP17.61■□□□□ 0.412e-8■■■■□ 22.7
CCDC43-205ENST00000592333 SULT1C3Q6IMI6 304 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 TRIM40Q6P9F5 258 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 CTAGE6Q86UF2 777 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 CEP97Q8IW35 865 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCDC43-205ENST00000592333 ZBED8Q8IZ13 594 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 SRFBP1Q8NEF9 429 aaKnown RBP17.61■□□□□ 0.41
CCDC43-205ENST00000592333 OR2L5Q8NG80 312 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 CAPZA3Q96KX2 299 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 SERINC2Q96SA4 455 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 CCDC77Q9BR77 488 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 EFCAB11Q9BUY7 163 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 ROGDIQ9GZN7 287 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms