RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 KCNK13Q9HB14 408 aa14.28□□□□□ -0.12
ERCC1-213ENST00000592023 LRIT2A6NDA9 550 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 SYCE1LA8MT33 242 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 K7EPI3 171 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 PRMT3O60678 531 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 AGFG2O95081 481 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 WDPCPO95876 746 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 TBX6O95947 436 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 MTHFD2P13995 350 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 GFAPP14136 432 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 CERS1P27544 350 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 MSH2P43246 934 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 TNFSF10P50591 281 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 SLC26A5P58743 744 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 LAPTM5Q13571 262 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 HIST2H2ACQ16777 129 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 EIF2S3LQ2VIR3 472 aaKnown RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 FHL5Q5TD97 284 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 HIST2H2AA3Q6FI13 130 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 KLC3Q6P597 504 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 CEP112Q8N8E3 955 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 FAM47BQ8NA70 645 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 OR2L5Q8NG80 312 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 RHEBL1Q8TAI7 183 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 GRHL3Q8TE85 626 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 SLC44A1Q8WWI5 657 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 SEC16BQ96JE7 1060 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 FUT8Q9BYC5 575 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 COPS7BQ9H9Q2 264 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 CLK4Q9HAZ1 481 aaKnown RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 AGPAT4Q9NRZ5 378 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 CPSF2Q9P2I0 782 aaKnown RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 TEKT2Q9UIF3 430 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF490Q9ULM2 529 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-213ENST00000592023 IKBKGQ9Y6K9 419 aa14.27□□□□□ -0.13
ERCC1-213ENST00000592023 A0A088AWK7 358 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 TRAV17A0A0B4J275 112 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 OR5H15A6NDH6 313 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 POC1B-GALNT4F8VUJ3 575 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 B3GALT2O43825 422 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 KLHL2O95198 593 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 PCNAP12004 261 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF10P21506 573 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-213ENST00000592023 HPDP32754 393 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-213ENST00000592023 RAB38P57729 211 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 RUNX2Q13950 521 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 NAA30Q147X3 362 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-213ENST00000592023 SETDB1Q15047 1291 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 TBCCQ15814 346 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 PFKFB4Q16877 469 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 ADPRMQ3LIE5 342 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 FAM180AQ6UWF9 173 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 TAOK1Q7L7X3 1001 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 MYLK4Q86YV6 388 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-213ENST00000592023 CRLF3Q8IUI8 442 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 BEST3Q8N1M1 668 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 TEX9Q8N6V9 391 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 PRR7Q8TB68 274 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 M1APQ8TC57 530 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 QRFPRQ96P65 431 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 F2RL3Q96RI0 385 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 RNF32Q9H0A6 362 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 MMP25Q9NPA2 562 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 NECTIN3Q9NQS3 549 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 PRDM9Q9NQV7 894 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 NFU1Q9UMS0 254 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 ANGPTL3Q9Y5C1 460 aa14.26□□□□□ -0.13
ERCC1-213ENST00000592023 RELNP78509 3460 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 IGKV3D-11A0A0A0MRZ8 115 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 TCRBV16S1A1N1A0A5B0 115 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ANKUB1A6NFN9 424 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 LRRC14BA6NHZ5 514 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 A8MUA0 341 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 E2F3O00716 465 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 SH3BGRLO75368 114 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 EPB42P16452 691 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 SERPINB9P50453 376 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ST13P50502 369 aaKnown RBP14.25□□□□□ -0.13
ERCC1-213ENST00000592023 MTTPP55157 894 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 DDX39BQ13838 428 aaKnown RBP14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ELOAQ14241 798 aaKnown RBP14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ACAP2Q15057 778 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 TECRLQ5HYJ1 363 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ACER2Q5QJU3 275 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 GRHL2Q6ISB3 625 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 MED27Q6P2C8 311 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ABHD17CQ6PCB6 329 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 PLD6Q8N2A8 252 aaKnown RBP14.25□□□□□ -0.13
ERCC1-213ENST00000592023 KIF2BQ8N4N8 673 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ARMC2Q8NEN0 867 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 HAS2Q92819 552 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF354BQ96LW1 612 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 GPR78Q96P69 363 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 SERINC2Q96SA4 455 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 CSF3RQ99062 836 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 NPLQ9BXD5 320 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-213ENST00000592023 MS4A8Q9BY19 250 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 PRTFDC1Q9NRG1 225 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF358Q9NW07 568 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 STMN3Q9NZ72 180 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms