RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SLC19A2O60779 497 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 DNAJB6O75190 326 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 NEURL1O76050 574 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 MLYCDO95822 493 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 FHP07954 510 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 SP1P08047 785 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 SAT1P21673 171 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 JAK1P23458 1154 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
VPS4B-207ENST00000591519 SSTR1P30872 391 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 SCTRP47872 440 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 PGGT1BP53609 377 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 FRG1Q14331 258 aaKnown RBP9.76□□□□□ -0.85
VPS4B-207ENST00000591519 OR1C1Q15619 314 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 CATSPEREQ5SY80 951 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 HECTD2Q5U5R9 776 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 STEAP4Q687X5 459 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 FCRLBQ6BAA4 426 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 SPINK14Q6IE38 97 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 RPS19BP1Q86WX3 136 aaKnown RBP9.76□□□□□ -0.85
VPS4B-207ENST00000591519 SPPL2CQ8IUH8 684 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 MMGT1Q8N4V1 131 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 TBC1D19Q8N5T2 526 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 GPATCH11Q8N954 259 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 TMEM178AQ8NBL3 297 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 OR5T3Q8NGG3 340 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 ZCCHC10Q8TBK6 192 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 ADAMTS18Q8TE60 1221 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 UTP15Q8TED0 518 aaKnown RBP9.76□□□□□ -0.85
VPS4B-207ENST00000591519 NEIL2Q969S2 332 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 ALKBH8Q96BT7 664 aaKnown RBP9.76□□□□□ -0.85
VPS4B-207ENST00000591519 PYCR2Q96C36 320 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 LRRC39Q96DD0 335 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 GPR137Q96N19 417 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 GTF3C1Q12789 2109 aa9.76□□□□□ -0.85
VPS4B-207ENST00000591519 NCOA6Q14686 2063 aaPredicted RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 GABRR3A8MPY1 467 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 E7ESA3 106 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 NDUFS4O43181 175 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 CDC123O75794 336 aaPredicted RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 ELAVL4P26378 380 aaKnown RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 HTR1EP28566 365 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 EEF1DP29692 281 aaKnown RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 TRHRP34981 398 aaPredicted RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 PTGER4P35408 488 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 CASP6P55212 293 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 OR4D2P58180 307 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 TAS2R50P59544 299 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 PMP22Q01453 160 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 ALDH6A1Q02252 535 aaKnown RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 CAV1Q03135 178 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 MGAT5Q09328 741 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 HYAL2Q12891 473 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 CSHL1Q14406 222 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 DEFB134Q4QY38 66 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 SLC25A25Q6KCM7 469 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 FAM45BPQ6NSW5 357 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 SBSNQ6UWP8 590 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 QSOX2Q6ZRP7 698 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 ABHD13Q7L211 337 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 SIAH3Q8IW03 269 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 MCEMP1Q8IX19 187 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 NFAM1Q8NET5 270 aaPredicted RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 TRPV3Q8NET8 790 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 FAM45AQ8TCE6 357 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 SLC5A11Q8WWX8 675 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 IFT81Q8WYA0 676 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 TSLPQ969D9 159 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 FRMD6Q96NE9 622 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 OLFM1Q99784 485 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 CDCP1Q9H5V8 836 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 ANKRD10Q9NXR5 420 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 ZFATQ9P243 1243 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 LRFN1Q9P244 771 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
VPS4B-207ENST00000591519 PSAT1Q9Y617 370 aa9.75□□□□□ -0.85
VPS4B-207ENST00000591519 PKDREJQ9NTG1 2253 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 IGKV3D-11A0A0A0MRZ8 115 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 TCRBV16S1A1N1A0A5B0 115 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 PABPN1LA6NDY0 278 aaKnown RBP9.74□□□□□ -0.85
VPS4B-207ENST00000591519 URADA6NGE7 173 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF860A6NHJ4 632 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 ASNA1O43681 348 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 PRMT3O60678 531 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 SERPINA6P08185 405 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 RHOXF2BP0C7M4 288 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 MAGEA4P43358 317 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 SMSP52788 366 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 MLF1P58340 268 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 BTG2P78543 158 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 ADORA2A-AS1P86434 159 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 CDKL1Q00532 357 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 RGS1Q08116 209 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 NAA30Q147X3 362 aaPredicted RBP9.74□□□□□ -0.85
VPS4B-207ENST00000591519 C3AR1Q16581 482 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 PPP1R3AQ16821 1122 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 ZNF468Q5VIY5 522 aaPredicted RBP9.74□□□□□ -0.85
VPS4B-207ENST00000591519 NXPE4Q6UWF7 544 aa9.74□□□□□ -0.85
VPS4B-207ENST00000591519 GALNTL5Q7Z4T8 443 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms