RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 TMCO1Q9UM00 188 aa21.9■■□□□ 1.1
CLPTM1-212ENST00000591304 NFU1Q9UMS0 254 aa21.9■■□□□ 1.1
CLPTM1-212ENST00000591304 ANGPTL3Q9Y5C1 460 aa21.9■■□□□ 1.1
CLPTM1-212ENST00000591304 CNTRLQ7Z7A1 2325 aa21.9■■□□□ 1.1
CLPTM1-212ENST00000591304 IGHV3-20A0A0C4DH32 117 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 B3GALT2O43825 422 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 KLK8O60259 260 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 PRAMEF4O60810 478 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 B3GALT4O96024 378 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 RBP1P09455 135 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 ITGAMP11215 1152 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 COL6A2P12110 1019 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 EPORP19235 508 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 HNRNPH1P31943 449 aaKnown RBP21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 PIK3CGP48736 1102 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 OR4D2P58180 307 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 RCN2Q14257 317 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 NAA30Q147X3 362 aaPredicted RBP21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 SETDB1Q15047 1291 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 TSNAXIP1Q2TAA8 658 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 SFT2D3Q587I9 215 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 PRAMEF9Q5VWM5 478 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 MED27Q6P2C8 311 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 TRMT10CQ7L0Y3 403 aaKnown RBP21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 CISD2Q8N5K1 135 aaKnown RBP21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 CNDP1Q96KN2 507 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 PTCHD1Q96NR3 888 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 ROGDIQ9GZN7 287 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 MMP25Q9NPA2 562 aa21.89■■□□□ 1.09
CLPTM1-212ENST00000591304 SYNDIG1LA6NDD5 238 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 OR2W5A6NFC9 320 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 POC1B-GALNT4F8VUJ3 575 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 DNAJB6O75190 326 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 ABHD2P08910 425 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 MAGEA12P43365 314 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 PFKFB4Q16877 469 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 PAPD4Q6PIY7 484 aaKnown RBP21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 LAS2Q8IYD9 372 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 SHISA5Q8N114 240 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 CA13Q8N1Q1 262 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 ZNF354BQ96LW1 612 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 GPR78Q96P69 363 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 SERINC2Q96SA4 455 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 AICDAQ9GZX7 198 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 COPS7BQ9H9Q2 264 aaPredicted RBP21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 STMN3Q9NZ72 180 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 MRPS33Q9Y291 106 aaKnown RBP21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 MMACHCQ9Y4U1 282 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 ASB1Q9Y576 335 aa21.88■■□□□ 1.09
CLPTM1-212ENST00000591304 CLDN4O14493 209 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 UGDHO60701 494 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 CELA2AP08217 269 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 CD22P20273 847 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 MTTPP55157 894 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 UBAP2LQ14157 1087 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 PCBP2Q15366 365 aaKnown RBP eCLIP21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 TMEM35AQ53FP2 167 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 PRR30Q53SZ7 412 aaPredicted RBP21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 UBAP2Q5T6F2 1119 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 LIPJQ5W064 366 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 H3F3CQ6NXT2 135 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 RPUSD3Q6P087 351 aaKnown RBP21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 CHSY3Q70JA7 882 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 TEX9Q8N6V9 391 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 TSLPQ969D9 159 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 KCNC2Q96PR1 638 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 KCNK13Q9HB14 408 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 PRM3Q9NNZ6 103 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 ASF1BQ9NVP2 202 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 CSAG2Q9Y5P2 127 aa21.87■■□□□ 1.09
CLPTM1-212ENST00000591304 TRAV17A0A0B4J275 112 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 EXOC1LA0A1B0GW35 172 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 C4orf51C9J302 202 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 CDK2AP1O14519 115 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 TNFSF10P50591 281 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 PLA2G16P53816 162 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 TAS2R50P59544 299 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 GRHL2Q6ISB3 625 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 ABHD17CQ6PCB6 329 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 VN1R5Q7Z5H4 357 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 FAM26EQ8N5C1 309 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 SUN3Q8TAQ9 357 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 ZNF473Q8WTR7 871 aaKnown RBP21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 DCAKDQ8WVC6 231 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 QRFPRQ96P65 431 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 BARD1Q99728 777 aaKnown RBP21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 ABI3Q9P2A4 366 aa21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 RP1L1Q8IWN7 2480 aaPredicted RBP21.86■■□□□ 1.09
CLPTM1-212ENST00000591304 SPENQ96T58 3664 aaKnown RBP21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 FLNCQ14315 2725 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 TCRBV16S1A1N1A0A5B0 115 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 CLEC18AA5D8T8 446 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 A8MUI8 341 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 TCP11X1B4DZS4 312 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 TBX6O95947 436 aaPredicted RBP21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 SNRPAP09012 282 aaKnown RBP21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 GNLYP22749 145 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 HSD17B7P56937 341 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 RAB38P57729 211 aa21.85■■□□□ 1.09
CLPTM1-212ENST00000591304 SLC26A5P58743 744 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms