RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 C1GALT1C1LP0DN25 315 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 ACPPP15309 386 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 ALOX12P18054 663 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 CD22P20273 847 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 AGTR2P50052 363 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 EMP2P54851 167 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 TLE1Q04724 770 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 RGS1Q08116 209 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 PCDH1Q08174 1060 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 RAPSNQ13702 412 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 SLBPQ14493 270 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 UAP1Q16222 522 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 PDK4Q16654 411 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 COLEC12Q5KU26 742 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 LRRC70Q7Z2Q7 622 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 HPS6Q86YV9 775 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 IFT20Q8IY31 132 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 RBMXL3Q8N7X1 1067 aaKnown RBP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 TRPV3Q8NET8 790 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 OR51Q1Q8NH59 317 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 UTP15Q8TED0 518 aaKnown RBP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 DCAKDQ8WVC6 231 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 EXT2Q93063 718 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 C8orf44Q96CB5 159 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 SMIM10Q96HG1 83 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 YIPF2Q9BWQ6 316 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 CAPS2Q9BXY5 557 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 TRIM4Q9C037 500 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 PITHD1Q9GZP4 211 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 VN1R1Q9GZP7 353 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 NT5DC2Q9H857 520 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 CD274Q9NZQ7 290 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 HCN3Q9P1Z3 774 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 C5AR2Q9P296 337 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF180Q9UJW8 692 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 LRRK2Q5S007 2527 aa10.58□□□□□ -0.72
SMAD4-211ENST00000590499 ASH1LQ9NR48 2969 aaKnown RBP10.58□□□□□ -0.72
SMAD4-211ENST00000590499 A0A087WUV0 522 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 IGHV1-45A0A0A0MS14 117 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF860A6NHJ4 632 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 KLK8O60259 260 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 DNAJB6O75190 326 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 SORBS2O94875 1100 aaKnown RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 KLHL2O95198 593 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 B3GALT4O96024 378 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 HEXBP07686 556 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 SERPINA6P08185 405 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 INHBAP08476 426 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 ZNF888P0CJ79 500 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 GSTM2P28161 218 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 GCAP28676 217 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 CASP2P42575 452 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 XCR1P46094 333 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 CD97P48960 835 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 SERPINB9P50453 376 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 ACAP2Q15057 778 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 PCOLCEQ15113 449 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 RBBP5Q15291 538 aaKnown RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 TBCCQ15814 346 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 FAM83EQ2M2I3 478 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 NADK2Q4G0N4 442 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 DEFB134Q4QY38 66 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 IGFL3Q6UXB1 125 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 TMIGD1Q6UXZ0 262 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 TRMT10CQ7L0Y3 403 aaKnown RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 NDUFAF7Q7L592 441 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 VN1R5Q7Z5H4 357 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 PLD6Q8N2A8 252 aaKnown RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 TEX19Q8NA77 164 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 TTLQ8NG68 377 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 OR5T3Q8NGG3 340 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 SEC16BQ96JE7 1060 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 VPS50Q96JG6 964 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 RHOXF2Q9BQY4 288 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 CD244Q9BZW8 370 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 EPB41L4BQ9H329 900 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 KLHL31Q9H511 634 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 ZBTB20Q9HC78 741 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 LANCL2Q9NS86 450 aa10.57□□□□□ -0.72
SMAD4-211ENST00000590499 G3BP2Q9UN86 482 aaKnown RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
SMAD4-211ENST00000590499 USP9XQ93008 2570 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SYCE1LA8MT33 242 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SUPT3HB4E1H0 165 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 RIPK2O43353 540 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 CCNT2O60583 730 aaKnown RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 KLHL41O60662 606 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 DPM1O60762 260 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SUPT3HO75486 399 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 S100BP04271 92 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-211ENST00000590499 SERPIND1P05546 499 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 FAM153BP0C7A2 387 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 IL10P22301 178 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 CXCR2P25025 360 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 ITGA3P26006 1051 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 CNTFP26441 200 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 TYK2P29597 1187 aa10.56□□□□□ -0.72
SMAD4-211ENST00000590499 HNRNPH1P31943 449 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms