RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 DNAJB6O75190 326 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 SUPT3HO75486 399 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 WDPCPO95876 746 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 C2P06681 752 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 HNRNPH1P31943 449 aaKnown RBP13.57□□□□□ -0.24
DDX39A-208ENST00000588692 CASP2P42575 452 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 KCNC1P48547 511 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 TAS2R50P59544 299 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 BTN3A2P78410 334 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 IRF8Q02556 426 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 TGM3Q08188 693 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 CHIT1Q13231 466 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 BMPR2Q13873 1038 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 MROH9Q5TGP6 573 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 TRIM40Q6P9F5 258 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 CENPLQ8N0S6 344 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-208ENST00000588692 LGI4Q8N135 537 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 ST6GALNAC3Q8NDV1 305 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 CATSPER1Q8NEC5 780 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 ARMC2Q8NEN0 867 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 OR2L5Q8NG80 312 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 SUN3Q8TAQ9 357 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 GRHL3Q8TE85 626 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 FAR1Q8WVX9 515 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 UBE2E3Q969T4 207 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 NXNL1Q96CM4 212 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 PTCHD1Q96NR3 888 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 REXO4Q9GZR2 422 aaKnown RBP13.57□□□□□ -0.24
DDX39A-208ENST00000588692 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX39A-208ENST00000588692 CDC42EP4Q9H3Q1 356 aaKnown RBP13.57□□□□□ -0.24
DDX39A-208ENST00000588692 PLA2G3Q9NZ20 509 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 STMN3Q9NZ72 180 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 ABI3Q9P2A4 366 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 OPTCQ9UBM4 332 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 MMACHCQ9Y4U1 282 aa13.57□□□□□ -0.24
DDX39A-208ENST00000588692 IGKV3D-11A0A0A0MRZ8 115 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 TCRBV16S1A1N1A0A5B0 115 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 HMX2A2RU54 273 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 SYNDIG1LA6NDD5 238 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 A8MUI8 341 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 K7EPI3 171 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 UBXN8O00124 270 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 CDK2AP1O14519 115 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 PRAMEF4O60810 478 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 EDN3P14138 238 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 EPORP19235 508 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 CD22P20273 847 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 SERPINB1P30740 379 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 GMPRP36959 345 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 SLC26A5P58743 744 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 PCDH1Q08174 1060 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 ACAP2Q15057 778 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 UAP1Q16222 522 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 MEP1AQ16819 746 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 ACER2Q5QJU3 275 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 PRAMEF9Q5VWM5 478 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 KLC3Q6P597 504 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 TAOK1Q7L7X3 1001 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 VN1R5Q7Z5H4 357 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 SLC5A8Q8N695 610 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 BCORP1Q8N888 145 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 SRFBP1Q8NEF9 429 aaKnown RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 KCTD4Q8WVF5 259 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 MRRFQ96E11 262 aaKnown RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 COPS7BQ9H9Q2 264 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 ZNF490Q9ULM2 529 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 MRPS33Q9Y291 106 aaKnown RBP13.56□□□□□ -0.24
DDX39A-208ENST00000588692 ASB1Q9Y576 335 aa13.56□□□□□ -0.24
DDX39A-208ENST00000588692 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
DDX39A-208ENST00000588692 A0A096LPK6 155 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 B3GALT2O43825 422 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 KLHL2O95198 593 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 TBX6O95947 436 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-208ENST00000588692 ALDOAP04075 364 aaKnown RBP13.55□□□□□ -0.24
DDX39A-208ENST00000588692 INHBAP08476 426 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 MTHFD2P13995 350 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 EPB42P16452 691 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 TYK2P29597 1187 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 MTTPP55157 894 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 HSD17B7P56937 341 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 RAB38P57729 211 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 IRF9Q00978 393 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 RCN2Q14257 317 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 NAA30Q147X3 362 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-208ENST00000588692 TERF2Q15554 542 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 ABHD17CQ6PCB6 329 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 SSC4DQ8WTU2 575 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 MAGEB10Q96LZ2 347 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-208ENST00000588692 QRFPRQ96P65 431 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 SERINC2Q96SA4 455 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 SLX1AQ9BQ83 275 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 ROGDIQ9GZN7 287 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 OLAHQ9NV23 265 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 PCDHGB6Q9Y5F9 930 aa13.55□□□□□ -0.24
DDX39A-208ENST00000588692 IKBKGQ9Y6K9 419 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms