RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SLC6A2P23975 617 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 NUBP1P53384 320 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 RAB8AP61006 207 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 C2orf80Q0P641 193 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 CEACAM7Q14002 265 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 NR0B2Q15466 257 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 SPRED1Q7Z699 444 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 KIAA2013Q8IYS2 634 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 FBXW8Q8N3Y1 598 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 CAMKVQ8NCB2 501 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 OR6C4Q8NGE1 309 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 UTP15Q8TED0 518 aaKnown RBP24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 RERGQ96A58 199 aaPredicted RBP24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 AHCYL2Q96HN2 611 aaKnown RBP24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 ABCD2Q9UBJ2 740 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 PACSIN3Q9UKS6 424 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 CACNA1HO95180 2353 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 RP1P56715 2156 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 IGHV5-51A0A0C4DH38 117 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 SCELO95171 688 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 SMIM10L1P0DMW3 83 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 ENGP17813 658 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 ATP5A1P25705 553 aaKnown RBP24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 CD1CP29017 333 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 CSF2RBP32927 897 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 GSTM5P46439 218 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 ZNF385BQ569K4 471 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 ZC3H14Q6PJT7 736 aaKnown RBP24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 HPS6Q86YV9 775 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 MMP21Q8N119 569 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 DNAJC22Q8N4W6 341 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 Q8N9G6 341 aaPredicted RBP24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 OR8K5Q8NH50 307 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 MTERF3Q96E29 417 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 TCTN2Q96GX1 697 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 SMIM10Q96HG1 83 aa24.75■■□□□ 1.55
SCAMP4-210ENST00000588555 CROCCQ5TZA2 2017 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 TNFRSF10AO00220 468 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 C9P02748 559 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 PPM1FP49593 454 aaPredicted RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 SLC7A2P52569 658 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 TRA2BP62995 288 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 PLIN5Q00G26 463 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 KLC1Q07866 573 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 PLA2G2CQ5R387 149 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 CPTPQ5TA50 214 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 MRM1Q6IN84 353 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 TCEAL6Q6IPX3 200 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 PRMT9Q6P2P2 845 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 GUSBP11Q6P575 273 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 ZCCHC7Q8N3Z6 543 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 EID2Q8N6I1 236 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 ACOT4Q8N9L9 421 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 TCEAL3Q969E4 200 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 DUSP26Q9BV47 211 aa24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 GTPBP2Q9BX10 602 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 DENND2DQ9H6A0 471 aaPredicted RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 FAM120CQ9NX05 1096 aaKnown RBP24.74■■□□□ 1.55
SCAMP4-210ENST00000588555 PRR33A8MZF0 331 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 CASC3O15234 703 aaKnown RBP24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 ZNF888P0CJ79 500 aaPredicted RBP24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 RPL3P39023 403 aaKnown RBP24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 DEFB110Q30KQ9 67 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 AMZ1Q400G9 498 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 MANEAQ5SRI9 462 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 R3HCC1LQ7Z5L2 792 aaKnown RBP24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 SLC15A3Q8IY34 581 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 WDR60Q8WVS4 1066 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 PRPF18Q99633 342 aaKnown RBP24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 CHRNA10Q9GZZ6 450 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 KCNH6Q9H252 994 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 RMND5AQ9H871 391 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 PCDHA9Q9Y5H5 950 aa24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 MN1Q10571 1320 aaPredicted RBP24.73■■□□□ 1.55
SCAMP4-210ENST00000588555 EME2A4GXA9 379 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 KCNH1O95259 989 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 HOXB9P17482 250 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 PTPN6P29350 595 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 GABRA4P48169 554 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 TGM3Q08188 693 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 C6orf10Q5SRN2 563 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 LRIF1Q5T3J3 769 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 ANKRD46Q86W74 232 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 MSRB3Q8IXL7 192 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 CARFQ8N187 725 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 DNAJB14Q8TBM8 379 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 CGREF1Q99674 301 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 PAIP1Q9H074 479 aaKnown RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 TEX10Q9NXF1 929 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 ADA2Q9NZK5 511 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 TRBV5-3A0A0A0MS03 114 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 NME4O00746 187 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 ZSCAN9O15535 394 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 EIF2S1P05198 315 aaKnown RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 FAM58BPP0C7Q3 252 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 DDCP20711 480 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 CERS1P27544 350 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 VSX2P58304 361 aaPredicted RBP24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 PRSS53Q2L4Q9 553 aa24.72■■□□□ 1.55
SCAMP4-210ENST00000588555 ZC3H12BQ5HYM0 836 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms