RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 THAP3Q8WTV1 239 aaPredicted RBP13.42□□□□□ -0.26
VMP1-206ENST00000587945 GPR137Q96N19 417 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 TMEM79Q9BSE2 394 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 DERL2Q9GZP9 239 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 CLK4Q9HAZ1 481 aaKnown RBP13.42□□□□□ -0.26
VMP1-206ENST00000587945 POPDC3Q9HBV1 291 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 NSMCE4AQ9NXX6 385 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 CENPEQ02224 2701 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 CACNA1DQ01668 2161 aa13.42□□□□□ -0.26
VMP1-206ENST00000587945 LRIT2A6NDA9 550 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 TGFBR3LH3BV60 316 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 ERI3O43414 337 aaKnown RBP13.41□□□□□ -0.26
VMP1-206ENST00000587945 SLC25A12O75746 678 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 MYO1DO94832 1006 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 TBX6O95947 436 aaPredicted RBP13.41□□□□□ -0.26
VMP1-206ENST00000587945 CCDC166P0CW27 439 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 PPP2R1BP30154 601 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 HSPA7P48741 367 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 HNRNPFP52597 415 aaKnown RBP13.41□□□□□ -0.26
VMP1-206ENST00000587945 PLA2G16P53816 162 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 HSF1Q00613 529 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 POU4F1Q01851 419 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 CBLBQ13191 982 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 ART3Q13508 389 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 OR4D1Q15615 310 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.41□□□□□ -0.262e-7■■■■■ 32.6
VMP1-206ENST00000587945 RNFT1Q5M7Z0 435 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 VN1R5Q7Z5H4 357 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 GPSM1Q86YR5 675 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 TICAM1Q8IUC6 712 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 HORMAD2Q8N7B1 307 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 GAL3ST3Q96A11 431 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 MS4A6EQ96DS6 147 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 PDLIM2Q96JY6 352 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 FAR2Q96K12 515 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 ERP44Q9BS26 406 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 DEFB126Q9BYW3 111 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 PNO1Q9NRX1 252 aaKnown RBP13.41□□□□□ -0.26
VMP1-206ENST00000587945 WWOXQ9NZC7 414 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 RNF14Q9UBS8 474 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 CRYBG3Q68DQ2 2970 aa13.41□□□□□ -0.26
VMP1-206ENST00000587945 TRBV11-1A0A0K0K1C0 115 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 MYOCOSA0A1B0GUC4 107 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 TCRBV9S1A1TA0A576 114 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 RAD51CO43502 376 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CD1DP15813 335 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CYB561P49447 251 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CASP6P55212 293 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 ADORA2A-AS1P86434 159 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 KRTCAP3Q53RY4 240 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 SPPL2CQ8IUH8 684 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 KRT78Q8N1N4 520 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CPSF7Q8N684 471 aaKnown RBP13.4□□□□□ -0.26
VMP1-206ENST00000587945 SNX31Q8N9S9 440 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 FAM47BQ8NA70 645 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 APCDD1LQ8NCL9 501 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 BBOF1Q8ND07 529 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 TTLQ8NG68 377 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 MAGED4Q96JG8 741 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 DNAJC11Q9NVH1 559 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 GRHL1Q9NZI5 618 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 TXNDC16Q9P2K2 825 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 ZNF490Q9ULM2 529 aaPredicted RBP13.4□□□□□ -0.26
VMP1-206ENST00000587945 ZNF835Q9Y2P0 537 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 MMACHCQ9Y4U1 282 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CLDN16Q9Y5I7 305 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CREBBPQ92793 2442 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 MYO9AB2RTY4 2548 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CPAMD8Q8IZJ3 1885 aa13.4□□□□□ -0.26
VMP1-206ENST00000587945 CSMD1Q96PZ7 3565 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 ASNA1O43681 348 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 B3GALT2O43825 422 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 NME2P1O60361 137 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 CLEC3AO75596 197 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 FAM155BO75949 473 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 C1QAP02745 245 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 SNRPB2P08579 225 aaKnown RBP13.39□□□□□ -0.27
VMP1-206ENST00000587945 ESRRAP11474 423 aaPredicted RBP13.39□□□□□ -0.27
VMP1-206ENST00000587945 NME2P22392 152 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 CERS1P27544 350 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 HTR1EP28566 365 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 TRHRP34981 398 aaPredicted RBP13.39□□□□□ -0.27
VMP1-206ENST00000587945 HLCSP50747 726 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 GPX6P59796 221 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 CALCOCO2Q13137 446 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 C16orf47Q6ZP98 133 aaPredicted RBP13.39□□□□□ -0.27
VMP1-206ENST00000587945 C3orf62Q6ZUJ4 267 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
VMP1-206ENST00000587945 CLNKQ7Z7G1 428 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 SCUBE1Q8IWY4 988 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
VMP1-206ENST00000587945 ZNF808Q8N4W9 903 aaPredicted RBP13.39□□□□□ -0.27
VMP1-206ENST00000587945 FAM98AQ8NCA5 519 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms