RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DDIASQ8IXT1 998 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 SLC22A15Q8IZD6 547 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 HM13Q8TCT9 377 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 LKAAEAR1Q8TD35 194 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 THAP4Q8WY91 577 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 SLC7A6OSQ96CW6 309 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 ZNF501Q96CX3 271 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 SNRNP40Q96DI7 357 aaKnown RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 PPP3R2Q96LZ3 170 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 CCDC138Q96M89 665 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 OR52B2Q96RD2 323 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 INSM2Q96T92 566 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 NTMT1Q9BV86 223 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 ZNF385DQ9H6B1 395 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 EFCAB1Q9HAE3 211 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 ZBTB20Q9HC78 741 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 SEMA4BQ9NPR2 832 aaPredicted RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 SOHLH2Q9NX45 425 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 UTP6Q9NYH9 597 aaKnown RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 GALPQ9UBC7 116 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 EPHA6Q9UF33 1036 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 PRDM4Q9UKN5 801 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 SNX7Q9UNH6 387 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 NTNG1Q9Y2I2 539 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 FIS1Q9Y3D6 152 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 PCDHGA9Q9Y5G4 932 aaKnown RBP7.48□□□□□ -1.21
VMP1-204ENST00000587259 DNAJC15Q9Y5T4 150 aa7.48□□□□□ -1.21
VMP1-204ENST00000587259 ABCA12Q86UK0 2595 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 SLC5A10A0PJK1 596 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 OR5K3A6NET4 321 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 SLC9B1P1A6NJY1 282 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 SLC28A1O00337 649 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 UBFD1O14562 309 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 GSC2O15499 205 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 RGS14O43566 566 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 KDM1AO60341 852 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CCNT2O60583 730 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 CPNE3O75131 537 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 ALOX12BO75342 701 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CEACAM4O75871 244 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 GUCA1CO95843 209 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 AVPP01185 164 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 KRT6AP02538 564 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 KRT6BP04259 564 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CAPN1P07384 714 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CTSBP07858 339 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 COX4I1P13073 169 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 PVRP15151 417 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 POLR2CP19387 275 aaPredicted RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 POU3F2P20265 443 aaPredicted RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 CCND1P24385 295 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 PIK3R1P27986 724 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 OTX2P32243 289 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 PGM1P36871 562 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 HSD17B2P37059 387 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 KRT6CP48668 564 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CDH13P55290 713 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 ERVK-8P63133 956 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 KCNJ2P63252 427 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 ELF3P78545 371 aaPredicted RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 HSD11B2P80365 405 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 ART3Q13508 389 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 FASTKQ14296 549 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 SLC9A5Q14940 896 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 RPS6KA2Q15349 733 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 TRMT5Q32P41 509 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 XKR7Q5GH72 579 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 C1QL3Q5VWW1 255 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 TMEM220Q6QAJ8 160 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 FAM198BQ6UWH4 519 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CYHR1Q6ZMK1 362 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 LARP4Q71RC2 724 aaKnown RBP eCLIP7.47□□□□□ -1.21
VMP1-204ENST00000587259 GOLGA7Q7Z5G4 137 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 MILR1Q7Z6M3 343 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 TREML1Q86YW5 311 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 KLHDC8AQ8IYD2 350 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 MIER2Q8N344 545 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 D2HGDHQ8N465 521 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 RAB42Q8N4Z0 105 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 AVL9Q8NBF6 648 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 PCYOX1LQ8NBM8 494 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 OR1L3Q8NH93 324 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 METTL6Q8TCB7 284 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 STMN2Q93045 179 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 FBXL8Q96CD0 374 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 TUBGCP3Q96CW5 907 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CLIP3Q96DZ5 547 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 METTL2AQ96IZ6 378 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 GPR87Q9BY21 358 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 MRPL1Q9BYD6 325 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 SHCBP1LQ9BZQ2 653 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 WDR55Q9H6Y2 383 aaPredicted RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 NOL11Q9H8H0 719 aaKnown RBP7.47□□□□□ -1.21
VMP1-204ENST00000587259 IPPKQ9H8X2 491 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 WASH6PQ9NQA3 447 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 HRASLS2Q9NWW9 162 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 TAS2R1Q9NYW7 299 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 GPRC5BQ9NZH0 403 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 SEMA5BQ9P283 1151 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms