RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KLRC4-KLRK1H3BQV0 150 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 FCHO1O14526 889 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 KLK8O60259 260 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 MYO1DO94832 1006 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 KRT14P02533 472 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 SERPIND1P05546 499 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 RNH1P13489 461 aaKnown RBP11.06□□□□□ -0.64
BRCA1-225ENST00000586385 CXCR5P32302 372 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 AHRP35869 848 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 HNF4AP41235 474 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 GXYLT1Q4G148 440 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 DUPD1Q68J44 220 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 RTL6Q6ICC9 239 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 ARHGAP11AQ6P4F7 1023 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 LMNTD2Q8IXW0 634 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 B3GNT7Q8NFL0 401 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 PDLIM2Q96JY6 352 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 ZNF559Q9BR84 538 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 RHBGQ9H310 441 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 LIME1Q9H400 295 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 LIN28AQ9H9Z2 209 aaKnown RBP11.06□□□□□ -0.64
BRCA1-225ENST00000586385 KCNJ16Q9NPI9 418 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 IARS2Q9NSE4 1012 aaKnown RBP11.06□□□□□ -0.64
BRCA1-225ENST00000586385 PNPLA3Q9NST1 481 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 KCMF1Q9P0J7 381 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 SLC17A6Q9P2U8 582 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 KCNN3Q9UGI6 736 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 FAM215AQ9Y5M1 114 aa11.06□□□□□ -0.64
BRCA1-225ENST00000586385 ZNF407Q9C0G0 2248 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 FAM166BA8MTA8 275 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 FOXO6A8MYZ6 492 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 NPIPA2E9PIF3 369 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 NPIPA3F8WFD2 350 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 ZNF354AO60765 605 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-225ENST00000586385 GLSO94925 669 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-225ENST00000586385 OR6B1O95007 311 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 NADKO95544 446 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-225ENST00000586385 AHSGP02765 367 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 CD99P14209 185 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 CLCN2P51788 898 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 SARNPP82979 210 aaKnown RBP11.05□□□□□ -0.64
BRCA1-225ENST00000586385 RGS1Q08116 209 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 RUNX2Q13950 521 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 LRRC8EQ6NSJ5 796 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 ABHD13Q7L211 337 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 GAS2L3Q86XJ1 694 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 NAT8LQ8N9F0 302 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 OR2M7Q8NG81 312 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 SLC5A11Q8WWX8 675 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 NCLNQ969V3 563 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 FBXL8Q96CD0 374 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 TSNARE1Q96NA8 513 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 CLK4Q9HAZ1 481 aaKnown RBP11.05□□□□□ -0.64
BRCA1-225ENST00000586385 XAB2Q9HCS7 855 aaKnown RBP11.05□□□□□ -0.64
BRCA1-225ENST00000586385 ZNF358Q9NW07 568 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 ARL15Q9NXU5 204 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 TAS2R13Q9NYV9 303 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 FBXW2Q9UKT8 454 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 L3MBTL1Q9Y468 752 aa11.05□□□□□ -0.64
BRCA1-225ENST00000586385 ANKHD1Q8IWZ3 2542 aaKnown RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 A0A0G2JNJ9 132 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 G3V3Y1 287 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 BANF1O75531 89 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TBX6O95947 436 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 CELA3AP09093 270 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 GLI4P10075 376 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 ADH7P40394 386 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 RGS4P49798 205 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 PPIAP62937 165 aaKnown RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 SNTB1Q13884 538 aaKnown RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 CRYMQ14894 314 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TERF2Q15554 542 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TOR1AIP1Q5JTV8 583 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 SBSNQ6UWP8 590 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TMEM200AQ86VY9 491 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TGIF2LYQ8IUE0 185 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 MMP21Q8N119 569 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TMEM156Q8N614 296 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 SPC24Q8NBT2 197 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 OR5M9Q8NGP3 310 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 CALML6Q8TD86 181 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 MAIP1Q8WWC4 291 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 SREK1Q8WXA9 508 aaKnown RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 FOXC2Q99958 501 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TTYH2Q9BSA4 534 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 FAM167BQ9BTA0 163 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 TTTY12Q9BZ98 90 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 PNO1Q9NRX1 252 aaKnown RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 CCM2LQ9NUG4 571 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-225ENST00000586385 Q9UFV3 132 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 MMACHCQ9Y4U1 282 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 MAD1L1Q9Y6D9 718 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 DNHD1Q96M86 4753 aa11.04□□□□□ -0.64
BRCA1-225ENST00000586385 DNAJC13O75165 2243 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 ABCA2Q9BZC7 2435 aa11.03□□□□□ -0.64
BRCA1-225ENST00000586385 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms