RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TMEM214Q6NUQ4 689 aaKnown RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 ENPP7Q6UWV6 458 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 ZNF551Q7Z340 670 aaPredicted RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 PATL1Q86TB9 770 aaKnown RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 STK32CQ86UX6 486 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 ZDHHC21Q8IVQ6 265 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 SLC44A3Q8N4M1 653 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 ANKRD53Q8N9V6 530 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 LMNTD1Q8N9Z9 388 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 LINC01555Q8NAE3 123 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 SRFBP1Q8NEF9 429 aaKnown RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 OR52E1Q8NGJ3 308 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 RPLP0P6Q8NHW5 317 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 CYGBQ8WWM9 190 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 OR5P2Q8WZ92 322 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 NRBF2Q96F24 287 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 PRAP1Q96NZ9 151 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 SLC35A5Q9BS91 424 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 CHST8Q9H2A9 424 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 TMEM38AQ9H6F2 299 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 CLK4Q9HAZ1 481 aaKnown RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 FGF22Q9HCT0 170 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 POLMQ9NP87 494 aaPredicted RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 FZD3Q9NPG1 666 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 IL1RAPQ9NPH3 570 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 ADPRHL2Q9NX46 363 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 OR6C2Q9NZP2 312 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 MUTYHQ9UIF7 546 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 PCOLCE2Q9UKZ9 415 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 SNX7Q9UNH6 387 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 FAF1Q9UNN5 650 aaPredicted RBP10.76□□□□□ -0.69
LIG3-204ENST00000585740 PCDHGA2Q9Y5H1 932 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 ORC6Q9Y5N6 252 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 CFAP54Q96N23 3096 aa10.76□□□□□ -0.69
LIG3-204ENST00000585740 C2CD4DB7Z1M9 353 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 PDPK1O15530 556 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 PRICKLE3O43900 615 aaPredicted RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 NOBOXO60393 691 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 GUCY1B2O75343 617 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 E2F6O75461 281 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 KLHL18O94889 574 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 IFNA14P01570 189 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 SEMG1P04279 462 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 FABP3P05413 133 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 DRD2P14416 443 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 NDUFV2P19404 249 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 PSMB5P28074 263 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 CHI3L1P36222 383 aaPredicted RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 CCR5P51681 352 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 RPS6KA3P51812 740 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 RAD23AP54725 363 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 HBA1P69905 142 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 ADARB1P78563 741 aaKnown RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 TGM3Q08188 693 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 GAB1Q13480 694 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 SMAD4Q13485 552 aaKnown RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 ZIC1Q15915 447 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 NKG7Q16617 165 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 ZNF630Q2M218 657 aaPredicted RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 CYBRD1Q53TN4 286 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 IER5LQ5T953 404 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 RNF220Q5VTB9 566 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 OR2T5Q6IEZ7 315 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 SHQ1Q6PI26 577 aaKnown RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 TTC33Q6PID6 262 aaPredicted RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 PIWIL3Q7Z3Z3 882 aaKnown RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 ADCK2Q7Z695 626 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 FAM124AQ86V42 546 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 C10orf111Q8N326 155 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 FAM86B1Q8N7N1 296 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 ZNF555Q8NEP9 628 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 TSPAN14Q8NG11 270 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 OR2A1Q8NGT9 310 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 OR2T29Q8NH02 315 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 ZFPM2Q8WW38 1151 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 OR1E3Q8WZA6 343 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 FAM3CQ92520 227 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 SLC22A18Q96BI1 424 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 TM4SF18Q96CE8 201 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 F2RL3Q96RI0 385 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 FAIM2Q9BWQ8 316 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 ZNF717Q9BY31 904 aaPredicted RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 NLNQ9BYT8 704 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 GABARAPL1Q9H0R8 117 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 CAAP1Q9H8G2 361 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 DDX31Q9H8H2 851 aaKnown RBP10.75□□□□□ -0.69
LIG3-204ENST00000585740 KCNK12Q9HB15 430 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 NEUROD4Q9HD90 331 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 ZSCAN32Q9NX65 697 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 PLEKHM1Q9Y4G2 1056 aa10.75□□□□□ -0.69
LIG3-204ENST00000585740 A0A087WXM4 84 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TCRBV21S2A2A0A5A6 115 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 POM121BA6NF01 834 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 MAN2B1O00754 1011 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 SUV39H1O43463 412 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TNFRSF21O75509 655 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 GBAP04062 536 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 ALPLP05186 524 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 CDH2P19022 906 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms