RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 UROSP10746 265 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 ETV4P43268 484 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MTTPP55157 894 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 RPS13P62277 151 aaKnown RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PPP2R2AP63151 447 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 STX3Q13277 289 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 NCF4Q15080 339 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 SH2D4BQ5SQS7 431 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PRAMEF9Q5VWM5 478 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 INO80CQ6PI98 192 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PAGE2Q7Z2X7 111 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 CUZD1Q86UP6 607 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 DDIASQ8IXT1 998 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 ENDOVQ8N8Q3 282 aaKnown RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 AGR3Q8TD06 166 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 UTP15Q8TED0 518 aaKnown RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 FKBP10Q96AY3 582 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MIEF2Q96C03 454 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MS4A6EQ96DS6 147 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 VPS50Q96JG6 964 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 QRFPRQ96P65 431 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 OR51B5Q9H339 312 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MKKSQ9NPJ1 570 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 ENAMQ9NRM1 1142 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 HCN3Q9P1Z3 774 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PTRH2Q9Y3E5 179 aaKnown RBP13.15□□□□□ -0.3
TRAF4-215ENST00000584944 TSC22D4Q9Y3Q8 395 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 MAP4K5Q9Y4K4 846 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 PIEZO2Q9H5I5 2752 aa13.15□□□□□ -0.3
TRAF4-215ENST00000584944 A0A0G2JN53 185 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 LOC101059948A0A1B0GTJ6 334 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ZNF891A8MT65 544 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 AZIN1O14977 448 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 GALR3O60755 368 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 PDYNP01213 254 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ALBP02768 609 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 HSD3B1P14060 373 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 LIFP15018 202 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 NR1D1P20393 614 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 BGNP21810 368 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 JAK1P23458 1154 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 HSD3B2P26439 372 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 PTPN4P29074 926 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 HNRNPH1P31943 449 aaKnown RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ZNF33BQ06732 778 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 CUL3Q13618 768 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 MPP2Q14168 576 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 E2F2Q14209 437 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 MINDY4Q4G0A6 757 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ADNP2Q6IQ32 1131 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 CYP20A1Q6UW02 462 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 OVCH1Q7RTY7 1134 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 PRSS58Q8IYP2 241 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ARFGAP2Q8N6H7 521 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 STARD8Q92502 1023 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 SERINC2Q96SA4 455 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 MS4A8Q9BY19 250 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ILKAPQ9H0C8 392 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 KLHL31Q9H511 634 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ACTL8Q9H568 366 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 BRF2Q9HAW0 419 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 CLK4Q9HAZ1 481 aaKnown RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 INTS9Q9NV88 658 aaKnown RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 C14orf105Q9NVL8 296 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 ZNF446Q9NWS9 450 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
TRAF4-215ENST00000584944 TIMM22Q9Y584 194 aa13.14□□□□□ -0.31
TRAF4-215ENST00000584944 TENM4Q6N022 2769 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 HEATR5BQ9P2D3 2071 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 MYO1DO94832 1006 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 HEXBP07686 556 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 RNH1P13489 461 aaKnown RBP13.13□□□□□ -0.31
TRAF4-215ENST00000584944 IL10P22301 178 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 CCR10P46092 362 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 XCR1P46094 333 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 SLC1A6P48664 564 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 ABCE1P61221 599 aaKnown RBP13.13□□□□□ -0.31
TRAF4-215ENST00000584944 CSTF3Q12996 717 aaKnown RBP13.13□□□□□ -0.31
TRAF4-215ENST00000584944 LY6DQ14210 128 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 DEPDC1Q5TB30 811 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 CLEC6AQ6EIG7 209 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 OR4C11Q6IEV9 310 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 NUDT13Q86X67 352 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 RAB43Q86YS6 212 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 CLYBLQ8N0X4 340 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 OR51Q1Q8NH59 317 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 RAB3IL1Q8TBN0 382 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 WDR20Q8TBZ3 569 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 LRRC8CQ8TDW0 803 aa13.13□□□□□ -0.31
TRAF4-215ENST00000584944 ADAMTS18Q8TE60 1221 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms