RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 ARMCX6Q7L4S7 300 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 TRIM73Q86UV7 250 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 WFIKKN2Q8TEU8 576 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 MCCC1Q96RQ3 725 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 CPPED1Q9BRF8 314 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 RPP25Q9BUL9 199 aaKnown RBP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF282Q9UDV7 671 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 IL20RAQ9UHF4 553 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 TRBV5-4A0A0C4DH59 114 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 PDPK1O15530 556 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 AP2A2O94973 939 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 OLFM2O95897 454 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 CXCR2P25025 360 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 RYKP34925 604 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 P2RY2P41231 377 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 AVPR1BP47901 424 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 OLR1P78380 273 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 RGNQ15493 299 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 ZXDCQ2QGD7 858 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-217ENST00000584582 C16orf62Q7Z3J2 963 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 C16orf78Q8WTQ4 265 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 USP7Q93009 1102 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 TP53INP1Q96A56 240 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 RSPRY1Q96DX4 576 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 VWA8A3KMH1 1905 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 PRUNE2Q8WUY3 3088 aa10.83□□□□□ -0.68
TOP3A-217ENST00000584582 ZDBF2Q9HCK1 2354 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 GNB5O14775 395 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 MT-ND2P03891 347 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 LCKP06239 509 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 OCM2P0CE71 109 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 OCMP0CE72 109 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 PRR35P0CG20 571 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 OR12D1P0DN82 309 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 NPPBP16860 134 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TYRP1P17643 537 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 MATN1P21941 496 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 CCR8P51685 355 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 DSTNP60981 165 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TARDBPQ13148 414 aaKnown RBP eCLIP10.82□□□□□ -0.681e-9■■■■■ 37.6
TOP3A-217ENST00000584582 CST6Q15828 149 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF750Q32MQ0 723 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ERI1Q8IV48 349 aaKnown RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 SLC5A8Q8N695 610 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 AQP11Q8NBQ7 271 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TMEM203Q969S6 136 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 SIPA1Q96FS4 1042 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 MRPS30Q9NP92 439 aaKnown RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ADAP2Q9NPF8 381 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 MBNL1Q9NR56 388 aaKnown RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TAS2R9Q9NYW1 312 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 AREL1O15033 823 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ACOX3O15254 700 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 HOXB2P14652 356 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ALOX12P18054 663 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 GJA4P35212 333 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 SERPINB10P48595 397 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 PTPN5P54829 565 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 HOXC5Q00444 222 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 HYAL2Q12891 473 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 CAMK1Q14012 370 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 EXOC3L2Q2M3D2 409 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 LEXMQ3ZCV2 418 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 DPPA4Q7L190 304 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 DGLUCYQ7Z3D6 616 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 DCUN1D3Q8IWE4 304 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TMEFF1Q8IYR6 380 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 C7orf57Q8NEG2 295 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 DPH7Q9BTV6 452 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 NPLQ9BXD5 320 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 C1QTNF3Q9BXJ4 246 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 AMBRA1Q9C0C7 1298 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 VNN3Q9NY84 501 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 TVP23BQ9NYZ1 205 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 STOML2Q9UJZ1 356 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 AP3M1Q9Y2T2 418 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 SNX11Q9Y5W9 270 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ST14Q9Y5Y6 855 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 SCN3AQ9NY46 2000 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 SLC1A7O00341 560 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 KPNA4O00629 521 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 DLGAP3O95886 979 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 CD36P16671 472 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 FPR1P21462 350 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 PTX3P26022 381 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 S100A5P33763 92 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 PRLHRP49683 370 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 RFX4Q33E94 735 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ANKDD1AQ495B1 522 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 ZNF773Q6PK81 442 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 GHDCQ8N2G8 530 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 EZH1Q92800 747 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-217ENST00000584582 FNDC11Q9BVV2 318 aa10.82□□□□□ -0.68
TOP3A-217ENST00000584582 PRR14Q9BWN1 585 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms