RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 B8ZZF3 427 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 FOXE1O00358 373 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 DSCR3O14972 297 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 NDUFS4O43181 175 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 ONECUT2O95948 504 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 STATHP02808 62 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 EIF2S1P05198 315 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 SERPIND1P05546 499 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 SLC35G6P0C7Q6 338 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 PTPN4P29074 926 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 RPS13P62277 151 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 PHEXP78562 749 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 HYAL2Q12891 473 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 PWP1Q13610 501 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 ABRAXAS2Q15018 415 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 NCF4Q15080 339 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 HKDC1Q2TB90 917 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 NKAIN1Q4KMZ8 207 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 SGO1Q5FBB7 561 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 FAM199XQ6PEV8 388 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 RNF165Q6ZSG1 346 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 PIWIL2Q8TC59 973 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 TWIST2Q8WVJ9 160 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 CATSPER2Q96P56 530 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 HBEGFQ99075 208 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 MACROD1Q9BQ69 325 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 MS4A8Q9BY19 250 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 ADNPQ9H2P0 1102 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 TUBB1Q9H4B7 451 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 ACTL8Q9H568 366 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 STARD5Q9NSY2 213 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 PSD3Q9NYI0 1048 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 PPT2Q9UMR5 302 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 SPTA1P02549 2419 aa15.17■□□□□ 0.02
CSNK1D-223ENST00000584472 EDF1O60869 148 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 CREG1O75629 220 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 CHEK2O96017 543 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 TGFB1P01137 390 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 SERPINA6P08185 405 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 CD63P08962 238 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 PLA2G2AP14555 144 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 MUM1Q2TAK8 710 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 LINC00303Q3SY05 128 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 C1orf189Q5VU69 101 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 GARNL3Q5VVW2 1013 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 LCN10Q6JVE6 187 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 PRMT9Q6P2P2 845 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 SCIMPQ6UWF3 145 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 TTLL10Q6ZVT0 673 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 TRIM46Q7Z4K8 759 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 AFAP1L2Q8N4X5 818 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 CCT6BQ92526 530 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 FKBP10Q96AY3 582 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 CMTM7Q96FZ5 175 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 FAR2Q96K12 515 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 SLC6A16Q9GZN6 736 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 BRF2Q9HAW0 419 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 MARCOQ9UEW3 520 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 TUBD1Q9UJT1 453 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 RUVBL1Q9Y265 456 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 FARSAQ9Y285 508 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 PADI2Q9Y2J8 665 aa15.16■□□□□ 0.02
CSNK1D-223ENST00000584472 LRIT2A6NDA9 550 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 SLCO1B7G3V0H7 640 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 SKAP2O75563 359 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ETHE1O95571 254 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 JUNP05412 331 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 KITP10721 976 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 PIM1P11309 404 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 HSD3B1P14060 373 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ITGAXP20702 1163 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ALAS2P22557 587 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 PTX3P26022 381 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 HSD3B2P26439 372 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 HK2P52789 917 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 RGS1Q08116 209 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 CDC20Q12834 499 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 CSTF3Q12996 717 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 LY6DQ14210 128 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ADPRMQ3LIE5 342 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 TMEM214Q6NUQ4 689 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ARHGEF39Q8N4T4 335 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ENDOVQ8N8Q3 282 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 KCT2Q8NC54 265 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 MVB12AQ96EY5 273 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 C10orf90Q96M02 699 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 SEMA4CQ9C0C4 833 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 AICDAQ9GZX7 198 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 PRM3Q9NNZ6 103 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 IFT80Q9P2H3 777 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 NDOR1Q9UHB4 597 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 PTGDR2Q9Y5Y4 395 aa15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 MRPS18BQ9Y676 258 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-223ENST00000584472 SCN3AQ9NY46 2000 aa15.14■□□□□ 0.01
CSNK1D-223ENST00000584472 PIP5K1BO14986 540 aa15.14■□□□□ 0.01
CSNK1D-223ENST00000584472 HDAC3O15379 428 aa15.14■□□□□ 0.01
CSNK1D-223ENST00000584472 NKX2-8O15522 239 aa15.14■□□□□ 0.01
CSNK1D-223ENST00000584472 VIMP08670 466 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms