RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 MGAT4DA6NG13 374 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 F8W8V4 182 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 G3V2L1 256 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 CD1DP15813 335 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 CD9P21926 228 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 PEBP1P30086 187 aaKnown RBP10.85□□□□□ -0.67
NUP85-224ENST00000583948 SKIV2L2P42285 1042 aaKnown RBP10.85□□□□□ -0.67
NUP85-224ENST00000583948 GCGRP47871 477 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 RGS4P49798 205 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 CLCN7P51798 805 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 IL2P60568 153 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 KLC1Q07866 573 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 BST1Q10588 318 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 STX3Q13277 289 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 NAPRTQ6XQN6 538 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 CXXC5Q7LFL8 322 aaKnown RBP10.85□□□□□ -0.67
NUP85-224ENST00000583948 AMIGO1Q86WK6 493 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 CARFQ8N187 725 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 RAB3IL1Q8TBN0 382 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 PROKR1Q8TCW9 393 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 DTX3LQ8TDB6 740 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 EEF1AKMT1Q8WVE0 214 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 HAS2Q92819 552 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 ARSGQ96EG1 525 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 DMRTA2Q96SC8 542 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 ELAC2Q9BQ52 826 aaKnown RBP10.85□□□□□ -0.67
NUP85-224ENST00000583948 C17orf62Q9BQA9 187 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 ZNF559Q9BR84 538 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 ZCCHC2Q9C0B9 1178 aaKnown RBP10.85□□□□□ -0.67
NUP85-224ENST00000583948 DERL2Q9GZP9 239 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 RNF112Q9ULX5 631 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 PPT2Q9UMR5 302 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 DHRS7Q9Y394 339 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 AP1M2Q9Y6Q5 423 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
NUP85-224ENST00000583948 ATRQ13535 2644 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 C2orf74A8MZ97 194 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 SUPT3HB4E1H0 165 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 PROM1O43490 865 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 NRP2O60462 931 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 MAN1A2O60476 641 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 TRIM13O60858 407 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 EDF1O60869 148 aaKnown RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 SMIM24O75264 130 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 H2AFYO75367 372 aaKnown RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 SUPT3HO75486 399 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 AP2A2O94973 939 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 CRYABP02511 175 aaKnown RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 FTH1P02794 183 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 SERPINE1P05121 402 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 SBK3P0C264 359 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 ATP5F1P24539 256 aaPredicted RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 EFNA3P52797 238 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 ATP6V0D1P61421 351 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 TFF3Q07654 80 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 ASPHQ12797 758 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 OR4D1Q15615 310 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 TSNQ15631 228 aaKnown RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 TTLL9Q3SXZ7 439 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 LIPMQ5VYY2 423 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 CLEC9AQ6UXN8 241 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 Q6ZPB1 254 aaPredicted RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 NEK10Q6ZWH5 1172 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 CCDC71Q8IV32 467 aaPredicted RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 KBTBD2Q8IY47 623 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 MYO1HQ8N1T3 1032 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 CHDHQ8NE62 594 aaPredicted RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 OR2L2Q8NH16 312 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 THOC1Q96FV9 657 aaKnown RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 SIGLEC12Q96PQ1 595 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 CRB3Q9BUF7 120 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 DNAJB12Q9NXW2 375 aaKnown RBP10.84□□□□□ -0.67
NUP85-224ENST00000583948 LRFN1Q9P244 771 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 COLEC10Q9Y6Z7 277 aa10.84□□□□□ -0.67
NUP85-224ENST00000583948 TARM1B6A8C7 271 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 CDC7O00311 574 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 QSOX1O00391 747 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 KLF11O14901 512 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 DLX3O60479 287 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 HPP00738 406 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 COX6A1P12074 109 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 ACPPP15309 386 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 SLC1A6P48664 564 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 PRKAA2P54646 552 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 MYBPHQ13203 477 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 BOP1Q14137 746 aaKnown RBP10.83□□□□□ -0.68
NUP85-224ENST00000583948 SYTL3Q4VX76 610 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 ACSBG2Q5FVE4 666 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 CES4AQ5XG92 561 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 FRA10AC1Q70Z53 315 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
NUP85-224ENST00000583948 PIWIL4Q7Z3Z4 852 aaKnown RBP10.83□□□□□ -0.68
NUP85-224ENST00000583948 ISCA2Q86U28 154 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 DMRTC2Q8IXT2 367 aaPredicted RBP10.83□□□□□ -0.68
NUP85-224ENST00000583948 TMEM151AQ8N4L1 468 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 CCNYL1Q8N7R7 359 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 OR5AR1Q8NGP9 310 aa10.83□□□□□ -0.68
NUP85-224ENST00000583948 DNAJB8Q8NHS0 232 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms