RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 I3L1I5 382 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 SGK494L7N484 410 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 DSCR3O14972 297 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 GALR3O60755 368 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 SCRG1O75711 98 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 NTRK1P04629 796 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 KLK1P06870 262 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ALDOCP09972 364 aaKnown RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 ZNF28P17035 718 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 LBPP18428 481 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ITGAXP20702 1163 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 HIST1H1TP22492 207 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 ALAS2P22557 587 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 CERS1P27544 350 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 ARFIP2P53365 341 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ARFIP1P53367 373 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ARSFP54793 590 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 RPL38P63173 70 aaKnown RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 CBX1P83916 185 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 EMX2Q04743 252 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 TGM3Q08188 693 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 HERC3Q15034 1050 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 NDUFA9Q16795 377 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 SMU1Q2TAY7 513 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 SPIN4Q56A73 249 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 DCAF12Q5T6F0 453 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 TMEM198Q66K66 360 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 OGFOD2Q6N063 350 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 RHBDD2Q6NTF9 364 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 NOXRED1Q6NXP6 359 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 GALNT18Q6P9A2 607 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 CYB5D1Q6P9G0 228 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 FOXR1Q6PIV2 292 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 CEACAM20Q6UY09 585 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 TTLL10Q6ZVT0 673 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ACAD11Q709F0 780 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 TMEM126BQ8IUX1 230 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 SHISA5Q8N114 240 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ACOT4Q8N9L9 421 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 FNDC5Q8NAU1 212 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 SRFBP1Q8NEF9 429 aaKnown RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 CEP70Q8NHQ1 597 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 NDC1Q9BTX1 674 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 CCDC28BQ9BUN5 200 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 C1orf50Q9BV19 199 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 DDA1Q9BW61 102 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 EBPLQ9BY08 206 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 ACTR5Q9H9F9 607 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 ANKHQ9HCJ1 492 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 DHCR7Q9UBM7 475 aaKnown RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 ADAM29Q9UKF5 820 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 NAALAD2Q9Y3Q0 740 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 TMEM184BQ9Y519 407 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 POLR3HQ9Y535 204 aaPredicted RBP9.04□□□□□ -0.96
RFFL-210ENST00000582308 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
RFFL-210ENST00000582308 E9PBE3 544 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 TMPRSS11DO60235 418 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 PCDH7O60245 1069 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 KLHL41O60662 606 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 RDH16O75452 317 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 KIAA0754O94854 1291 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 TNFSF15O95150 251 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SCELO95171 688 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 ANXA4P09525 319 aaPredicted RBP9.03□□□□□ -0.96
RFFL-210ENST00000582308 BCKDHAP12694 445 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SDC1P18827 310 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 TACR1P25103 407 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 TIA1P31483 386 aaKnown RBP eCLIP9.03□□□□□ -0.96
RFFL-210ENST00000582308 RORAP35398 523 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SSR2P43308 183 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 OR1D4P47884 311 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 DIO3P55073 304 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 MTTPP55157 894 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 RAB15P59190 212 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 ERVK-8P63133 956 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 OLR1P78380 273 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SLAMF1Q13291 335 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 RUNX2Q13950 521 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 CCNYL2Q5T2Q4 361 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 C1orf189Q5VU69 101 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 IL23RQ5VWK5 629 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 ZNF385CQ66K41 422 aaPredicted RBP9.03□□□□□ -0.96
RFFL-210ENST00000582308 MRM1Q6IN84 353 aaKnown RBP9.03□□□□□ -0.96
RFFL-210ENST00000582308 PAGE2Q7Z2X7 111 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SPATA19Q7Z5L4 167 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 ZCCHC7Q8N3Z6 543 aaKnown RBP9.03□□□□□ -0.96
RFFL-210ENST00000582308 METTL27Q8N6F8 245 aaPredicted RBP9.03□□□□□ -0.96
RFFL-210ENST00000582308 OR5T3Q8NGG3 340 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 MARK4Q96L34 752 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 RILPQ96NA2 401 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 GBP5Q96PP8 586 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SERINC2Q96SA4 455 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 SPRY4Q9C004 299 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 POLR1BQ9H9Y6 1135 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 TXLNGQ9NUQ3 528 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 ASIC5Q9NY37 505 aa9.03□□□□□ -0.96
RFFL-210ENST00000582308 KCMF1Q9P0J7 381 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms