RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	RAB42	Q8N4Z0	105 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	TMEM251	Q8N6I4	163 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	CSNK1A1L	Q8N752	337 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	LMNTD1	Q8N9Z9	388 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	LINC01555	Q8NAE3	123 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	MCU	Q8NE86	351 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	OR2L8	Q8NGY9	312 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	OR51Q1	Q8NH59	317 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	BLOC1S5	Q8TDH9	187 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	RERG	Q96A58	199 aa	Predicted RBP	5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	NTNG2	Q96CW9	530 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	IMP4	Q96G21	291 aa	Known RBP	5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	QRFPR	Q96P65	431 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	PCDHB18P	Q96TA0	734 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	FAM173A	Q9BQD7	235 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	RHNO1	Q9BSD3	238 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	MED18	Q9BUE0	208 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	ANGPTL4	Q9BY76	406 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	SLC25A51	Q9H1U9	297 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	DEPP	Q9NTK1	212 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	HPF1	Q9NWY4	346 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	GALNT8	Q9NY28	637 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	JKAMP	Q9P055	326 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158	TESMIN	Q9Y4I5	508 aa		5.52	□□□□□ -1.53
KPNB1-209	ENST00000580158		A0A0U1RQJ8	604 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	FEZF1	A0PJY2	475 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PINLYP	A6NC86	204 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ARHGEF33	A8MVX0	844 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	KCNK1	O00180	336 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PES1	O00541	588 aa	Known RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PPP1R12A	O14974	1030 aa	Predicted RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PHF2	O75151	1096 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	FBXO24	O75426	580 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	GLS	O94925	669 aa	Predicted RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	CNR1	P21554	472 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	CRYGS	P22914	178 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PCK1	P35558	622 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ACVR1B	P36896	505 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	XCR1	P46094	333 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	SSR4	P51571	173 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	DIO3	P55073	304 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	RPS4X	P62701	263 aa	Known RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ACTG1	P63261	375 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	MPP1	Q00013	466 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	MEF2A	Q02078	507 aa	Predicted RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PPID	Q08752	370 aa	Known RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	MAMLD1	Q13495	774 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	MAN2A1	Q16706	1144 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	HKDC1	Q2TB90	917 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	TMEM249	Q2WGJ8	235 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	SYTL3	Q4VX76	610 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	CCDC183	Q5T5S1	534 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PPP1R2P3	Q6NXS1	205 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	TTC23L	Q6PF05	361 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	FAM47E	Q6ZV65	393 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	MILR1	Q7Z6M3	343 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	GPALPP1	Q8IXQ4	340 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PM20D2	Q8IYS1	436 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	MCOLN2	Q8IZK6	566 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	SLC25A41	Q8N5S1	370 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	LRRC17	Q8N6Y2	441 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PLPP5	Q8NEB5	264 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	IGFBPL1	Q8WX77	278 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ELMO1	Q92556	727 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ART5	Q96L15	291 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	TEKT5	Q96M29	485 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ZNF830	Q96NB3	372 aa	Predicted RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	TNFRSF13C	Q96RJ3	184 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	RAB11FIP5	Q9BXF6	653 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	NDST4	Q9H3R1	872 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	GOLPH3L	Q9H4A5	285 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	ZNF696	Q9H7X3	374 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	L2HGDH	Q9H9P8	463 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	PCDH18	Q9HCL0	1135 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	KLHL28	Q9NXS3	571 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	UTP6	Q9NYH9	597 aa	Known RBP	5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	UBP1	Q9NZI7	540 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	FBXW2	Q9UKT8	454 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	KCNS2	Q9ULS6	477 aa		5.51	□□□□□ -1.53
KPNB1-209	ENST00000580158	CAD	P27708	2225 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	OR2W5	A6NFC9	320 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	MAGEB17	A8MXT2	336 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	NSA2	O95478	260 aa	Known RBP	5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	EPO	P01588	193 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	PF4	P02776	101 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	FTH1	P02794	183 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	TMEM253	P0C7T8	217 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	PKM	P14618	531 aa	Known RBP	5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	ITGA2	P17301	1181 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	ITGAL	P20701	1170 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	IL10	P22301	178 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	CMPK1	P30085	196 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	GDNF	P39905	211 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	CCNF	P41002	786 aa		5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	COMP	P49747	757 aa	Predicted RBP	5.5	□□□□□ -1.53
KPNB1-209	ENST00000580158	CLCN2	P51788	898 aa		5.5	□□□□□ -1.53

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