RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 MARCOQ9UEW3 520 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ADAM29Q9UKF5 820 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KLK13Q9UKR3 277 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TMED5Q9Y3A6 229 aa10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TMEM184BQ9Y519 407 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-210ENST00000578733 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TRABD2BA6NFA1 517 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TMEM233B4DJY2 109 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PSMD12O00232 456 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SAP18O00422 153 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 BRINP1O60477 761 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SH3BGRLO75368 114 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 KLHL18O94889 574 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 LINC00032P0C843 101 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PCSK2P16519 638 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 IL1RNP18510 177 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PRPH2P23942 346 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SLC5A2P31639 672 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 HNRNPH1P31943 449 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GSTM5P46439 218 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PLA2G16P53816 162 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GNGT1P63211 74 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 BTKQ06187 659 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 HYAL2Q12891 473 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 CAMK2BQ13554 666 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SLC9A5Q14940 896 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DEFB134Q4QY38 66 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SCIMPQ6UWF3 145 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ACAD11Q709F0 780 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 FAM9CQ8IZT9 166 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DSELQ8IZU8 1212 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 NLGN4XQ8N0W4 816 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 METTL4Q8N3J2 472 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 RNF175Q8N4F7 328 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 NLGN4YQ8NFZ3 816 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MR1Q95460 341 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TUBGCP3Q96CW5 907 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 CHMP6Q96FZ7 201 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PRR11Q96HE9 360 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 HBEGFQ99075 208 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MACROD1Q9BQ69 325 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 NUF2Q9BZD4 464 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ACPTQ9BZG2 426 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 FAM117AQ9C073 453 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 KLHL31Q9H511 634 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 LRTM1Q9HBL6 345 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TNFRSF12AQ9NP84 129 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SLCO1B3Q9NPD5 702 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 C1orf109Q9NX04 203 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 LYARQ9NX58 379 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DHCR7Q9UBM7 475 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PADI1Q9ULC6 663 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MRPS33Q9Y291 106 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 NAALAD2Q9Y3Q0 740 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 USH1CQ9Y6N9 552 aa10.7□□□□□ -0.7
CDK5RAP3-210ENST00000578733 A0A0A6YYC8 382 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 A0A1W2PNU3 283 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GNG14A0A1W2PPG7 69 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 BLACEA4D250 179 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 CDRT15L2A8MXV6 281 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 NPIPB8E9PQR5 432 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 I3L1I5 382 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MEN1O00255 615 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PLPP1O14494 284 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GALR3O60755 368 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SEC22BO75396 215 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TIAF1O95411 115 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 CTSBP07858 339 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 LIPCP11150 499 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DDX5P17844 614 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 IL10P22301 178 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 HIST1H1TP22492 207 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TLX1P31314 330 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GCGRP47871 477 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 BTN3A2P78410 334 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 HMGCS1Q01581 520 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 OCA2Q04671 838 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DSG2Q14126 1118 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SMU1Q2TAY7 513 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 UGT3A2Q3SY77 523 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GALNTL6Q49A17 601 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 XKR7Q5GH72 579 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 CCNYL2Q5T2Q4 361 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 C1orf189Q5VU69 101 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MARCH9Q86YJ5 346 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ZCCHC7Q8N3Z6 543 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 FNDC5Q8NAU1 212 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GALNT6Q8NCL4 622 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 C7orf57Q8NEG2 295 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 OR9A4Q8NGU2 314 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PMEPA1Q969W9 287 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 GBP5Q96PP8 586 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ZNF317Q96PQ6 595 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 EFHD1Q9BUP0 239 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 YIPF2Q9BWQ6 316 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MRPL1Q9BYD6 325 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SYNPO2LQ9H987 977 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 WDR41Q9HAD4 459 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MEAF6Q9HAF1 191 aa10.69□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SIRT5Q9NXA8 310 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms