RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TXNDC9O14530 226 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 NDUFAB1O14561 156 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 HAT1O14929 419 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 ZSCAN9O15535 394 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 KIF1CO43896 1103 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 SUSD5O60279 629 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 DEAF1O75398 565 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 RSL1D1O76021 490 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 SEMA3DO95025 777 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 DLGAP3O95886 979 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 JUNP05412 331 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 LINC00032P0C843 101 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 THRAP10827 490 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 PVRP15151 417 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 NELFEP18615 380 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 BCL6P41182 706 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 GABRA4P48169 554 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 HTR6P50406 440 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 NEK2P51955 445 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 ARFIP2P53365 341 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 PHEXP78562 749 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 MEF2AQ02078 507 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 KIAA0040Q15053 153 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TRIP6Q15654 476 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 PDCD2Q16342 344 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 ADPRMQ3LIE5 342 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMEM35AQ53FP2 167 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TCHHL1Q5QJ38 904 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 ZBTB37Q5TC79 503 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 VWA5B1Q5TIE3 1220 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 OGFOD2Q6N063 350 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 GALNT18Q6P9A2 607 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 FAM92BQ6ZTR7 304 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 MCATQ8IVS2 390 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 CAMKVQ8NCB2 501 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 FAM13CQ8NE31 585 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 NT5CQ8TCD5 201 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SLC13A3Q8WWT9 602 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 CMTM7Q96FZ5 175 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 PPP3R2Q96LZ3 170 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 C3orf30Q96M34 536 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 GFM1Q96RP9 751 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 MTERF1Q99551 399 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 SERPINI1Q99574 410 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 NUDT22Q9BRQ3 303 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SPATA9Q9BWV2 254 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 MS4A8Q9BY19 250 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 AKTIPQ9H8T0 292 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 FAM60AQ9NP50 221 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 DMRT3Q9NQL9 472 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 MRGBPQ9NV56 204 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 PLCL2Q9UPR0 1127 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 KLHL20Q9Y2M5 609 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 ARL2BPQ9Y2Y0 163 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 PTPRZ1P23471 2315 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 DCHS1Q96JQ0 3298 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TDRD6O60522 2096 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 IGHV5-10-1A0A0J9YXX1 117 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 D6RAR5 112 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMX2-CTNND1H3BSU7 103 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 LSM1O15116 133 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 PRAMEF10O60809 474 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 DIAPH2O60879 1101 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 RASSF9O75901 435 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 EPHA3P29320 983 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 CCKBRP32239 447 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TSFMP43897 325 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 RPS13P62277 151 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 EMX2Q04743 252 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TBL3Q12788 808 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 TUBB3Q13509 450 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 AP5B1Q2VPB7 878 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SLC9B1Q4ZJI4 515 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TCTE1Q5JU00 501 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 EXOSC6Q5RKV6 272 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 C6orf136Q5SQH8 315 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMTC4Q5T4D3 741 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 KHDRBS2Q5VWX1 349 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 SCIMPQ6UWF3 145 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 ACAD11Q709F0 780 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMPRSS9Q7Z410 1059 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 VN1R4Q7Z5H5 301 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SPATA19Q7Z5L4 167 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 ASPGQ86U10 573 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 PLD3Q8IV08 490 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 DDIASQ8IXT1 998 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.63□□□□□ -1.19
COPS3-215ENST00000578317 DTWD1Q8N5C7 304 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SRFBP1Q8NEF9 429 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 NETO1Q8TDF5 533 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 CHTF18Q8WVB6 975 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 C10orf82Q8WW14 230 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 MTFMTQ96DP5 389 aaKnown RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 PRR11Q96HE9 360 aaPredicted RBP7.63□□□□□ -1.19
COPS3-215ENST00000578317 OR52B2Q96RD2 323 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 EBF4Q9BQW3 602 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 TMEM120AQ9BXJ8 343 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 ACPTQ9BZG2 426 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 FAM107BQ9H098 131 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms