RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 C10orf88Q9H8K7 445 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 THYN1Q9P016 225 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 B4GALT7Q9UBV7 327 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 SLC12A6Q9UHW9 1150 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 POMT2Q9UKY4 750 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 CCL27Q9Y4X3 112 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 KLK4Q9Y5K2 254 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 POGZQ7Z3K3 1410 aa1.79□□□□□ -2.12
TOP2A-202ENST00000577541 TRAV18A0A075B6X5 111 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 TRBV5-4A0A0C4DH59 114 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 FAM168BA1KXE4 195 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 SRRM4A7MD48 611 aaKnown RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 HMGB1P1B2RPK0 211 aaPredicted RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 PDHXO00330 501 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 RTCAO00442 366 aaKnown RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 E2F3O00716 465 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 DKC1O60832 514 aaKnown RBP eCLIP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 OR6B1O95007 311 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 HSPA4LO95757 839 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 ANGPTL1O95841 491 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 C9P02748 559 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 THY1P04216 161 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 TCF4P15884 667 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 HSPA4P34932 840 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 NAGLUP54802 743 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 ROR1Q01973 937 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 RUNX3Q13761 415 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 KNOP1Q1ED39 458 aaKnown RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 ZNF506Q5JVG8 444 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 SPOUT1Q5T280 376 aaKnown RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 ATAD3CQ5T2N8 411 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 FHL5Q5TD97 284 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 TCEAL6Q6IPX3 200 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 ZNF770Q6IQ21 691 aaPredicted RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 TRAT1Q6PIZ9 186 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 PAMR1Q6UXH9 720 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 TRMT11Q7Z4G4 463 aaKnown RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 CAMKVQ8NCB2 501 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 KLHL30-AS1Q8NEE0 82 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 OCC1Q8TAD7 63 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 FLVCR1-AS1Q8TAF5 88 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 SNRNP27Q8WVK2 155 aaKnown RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 FER1L6-AS2Q96M78 137 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 PCDHB18PQ96TA0 734 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 SNX25Q9H3E2 840 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 NYAP2Q9P242 653 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 PLCL2Q9UPR0 1127 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 SATB2Q9UPW6 733 aa1.78□□□□□ -2.12
TOP2A-202ENST00000577541 ZNF256Q9Y2P7 627 aaPredicted RBP1.78□□□□□ -2.12
TOP2A-202ENST00000577541 TRGV8A0A0C4DH27 118 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 RPL37AP8A6NKH3 93 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 A8MU76 341 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 FAM220BPB1ANY3 271 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 H3BMM5 538 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 SIGLEC5O15389 551 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 KIF5CO60282 957 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 PRAF2O60831 178 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 FRAT2O75474 233 aaPredicted RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 VENTXO95231 258 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 MT-ND1P03886 318 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 MT-ND2P03891 347 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 CCDC175P0C221 793 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 SPP1P10451 314 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ANPEPP15144 967 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 GOT1P17174 413 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 TIA1P31483 386 aaKnown RBP eCLIP1.77□□□□□ -2.133e-7■■■■■ 32.3
TOP2A-202ENST00000577541 RPL34P49207 117 aaKnown RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 RAD23AP54725 363 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 CALD1Q05682 793 aaKnown RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 C17orf67Q0P5P2 114 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 GCKRQ14397 625 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ZNF273Q14593 569 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 COG2Q14746 738 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 PPA1Q15181 289 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 CDO1Q16878 200 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 LBHQ53QV2 105 aaPredicted RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 KRBOX4Q5JUW0 171 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 PLPP4Q5VZY2 271 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 EMBQ6PCB8 327 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 SHQ1Q6PI26 577 aaKnown RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 DCLRE1AQ6PJP8 1040 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 MOXD1Q6UVY6 613 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 BTNL8Q6UX41 500 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ERN2Q76MJ5 926 aaKnown RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 CHST3Q7LGC8 479 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 C5orf24Q7Z6I8 188 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 FAM219AQ8IW50 185 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ZBED8Q8IZ13 594 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 APCDD1Q8J025 514 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 PARP8Q8N3A8 854 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 C11orf42Q8N5U0 333 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 NKAIN3Q8N8D7 197 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 CCDC63Q8NA47 563 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 OR1B1Q8NGR6 318 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 NCOA7Q8NI08 942 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 GRK7Q8WTQ7 553 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ITLN1Q8WWA0 313 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 ZNF558Q96NG5 402 aa1.77□□□□□ -2.13
TOP2A-202ENST00000577541 BAG1Q99933 345 aaPredicted RBP1.77□□□□□ -2.13
TOP2A-202ENST00000577541 APOL2Q9BQE5 337 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms