RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MAT1AQ00266 395 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 SLC18A2Q05940 514 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 GRM7Q14831 915 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 NCF4Q15080 339 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 PDK4Q16654 411 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 NKAIN1Q4KMZ8 207 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 SOWAHCQ53LP3 525 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 TCTE1Q5JU00 501 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 ATG9BQ674R7 924 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 CYB5D1Q6P9G0 228 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 CCDC81Q6ZN84 652 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 SHISA6Q6ZSJ9 500 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 GOLGA7Q7Z5G4 137 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 TRABD2AQ86V40 505 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 IQCKQ8N0W5 287 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 TCAIMQ8N3R3 496 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 TEX9Q8N6V9 391 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 AMER3Q8N944 861 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 SNX31Q8N9S9 440 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 OR52B6Q8NGF0 335 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 OR9A4Q8NGU2 314 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 ZCCHC10Q8TBK6 192 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 SNRNP27Q8WVK2 155 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 STARD8Q92502 1023 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 WDR34Q96EX3 536 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 SLC45A3Q96JT2 553 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 BBC3Q96PG8 261 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 NDC1Q9BTX1 674 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 MRPL46Q9H2W6 279 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 PELI2Q9HAT8 420 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 COPG2Q9UBF2 871 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 NDOR1Q9UHB4 597 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 ZNF225Q9UK10 706 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 PCTPQ9UKL6 214 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 PCDHGA6Q9Y5G7 932 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 KCNE2Q9Y6J6 123 aa8.98□□□□□ -0.97
NPLOC4-219ENST00000576713 PIEZO2Q9H5I5 2752 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 HEATR5BQ9P2D3 2071 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 OR2W5A6NFC9 320 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 ZNF860A6NHJ4 632 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 SYCE1LA8MT33 242 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 NDUFS4O43181 175 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 IPO13O94829 963 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 ONECUT2O95948 504 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 S100BP04271 92 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 UMODP07911 640 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 IL1RNP18510 177 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 KRT15P19012 456 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 KRT4P19013 534 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 GNAZP19086 355 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 HRH2P25021 359 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 HNRNPH1P31943 449 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 CCR10P46092 362 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 TMPRSS3P57727 454 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 DCDP81605 110 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 CHIT1Q13231 466 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 CDK5R2Q13319 367 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 RBBP5Q15291 538 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 PCBP2Q15366 365 aaKnown RBP eCLIP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 XKR6Q5GH73 641 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 BEND6Q5SZJ8 279 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 LGSNQ5TDP6 509 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 MLIPQ5VWP3 458 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 FBXW10Q5XX13 1052 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 KLC3Q6P597 504 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 LRRC70Q7Z2Q7 622 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 ASPGQ86U10 573 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 FAM13CQ8NE31 585 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 ACMSDQ8TDX5 336 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 ADAMTS17Q8TE56 1095 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 SLC13A3Q8WWT9 602 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 CABS1Q96KC9 395 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 TMEM237Q96Q45 408 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 MRPL57Q9BQC6 102 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 CCDC77Q9BR77 488 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 TMEM109Q9BVC6 243 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 CNOT10Q9H9A5 744 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 GPRC5BQ9NZH0 403 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 OPTCQ9UBM4 332 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 SRPK3Q9UPE1 567 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 RNF11Q9Y3C5 154 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 AP1M2Q9Y6Q5 423 aa8.97□□□□□ -0.97
NPLOC4-219ENST00000576713 A0A0G2JN53 185 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 C21orf140B9A014 251 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 SGK494L7N484 410 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 CTIFO43310 598 aaKnown RBP8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 PLIN3O60664 434 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 SPAG7O75391 227 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 JRKO75564 520 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 CREG1O75629 220 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 SERPIND1P05546 499 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 RPS17P08708 135 aaKnown RBP8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 RBP1P09455 135 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 ZNF888P0CJ79 500 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 SMIM10L1P0DMW3 83 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 PTPN4P29074 926 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 CRHR1P34998 444 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 ADMP35318 185 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 HNF4AP41235 474 aa8.96□□□□□ -0.98
NPLOC4-219ENST00000576713 CASP2P42575 452 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms