RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TUBA3CQ13748 450 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 C4orf17Q53FE4 359 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 XKR6Q5GH73 641 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 GRTP1Q5TC63 336 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 MROH9Q5TGP6 573 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 RPUSD3Q6P087 351 aaKnown RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 TUBA3EQ6PEY2 450 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 RAPH1Q70E73 1250 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CYS1Q717R9 158 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 FAM47BQ8NA70 645 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 M1APQ8TC57 530 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 KCTD4Q8WVF5 259 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 KIAA1191Q96A73 305 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 F2RL3Q96RI0 385 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CSF3RQ99062 836 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CDCP1Q9H5V8 836 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 DMGDHQ9UI17 866 aaKnown RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 PTBP2Q9UKA9 531 aaKnown RBP11.15□□□□□ -0.62
LITAF-219ENST00000576334 SLC5A6Q9Y289 635 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CLDN16Q9Y5I7 305 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 CENPEQ02224 2701 aa11.15□□□□□ -0.62
LITAF-219ENST00000576334 DIDO1Q9BTC0 2240 aaKnown RBP11.15□□□□□ -0.63
LITAF-219ENST00000576334 DOPEY1Q5JWR5 2465 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 TEX15Q9BXT5 2789 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 IGKV3D-11A0A0A0MRZ8 115 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 TCRBV16S1A1N1A0A5B0 115 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 WIPF3A6NGB9 483 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 SUPT3HB4E1H0 165 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 RTCAO00442 366 aaKnown RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 PRAMEF2O60811 474 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 SUPT3HO75486 399 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 STK16O75716 305 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 GSTA2P09210 222 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 RNH1P13489 461 aaKnown RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 EDN3P14138 238 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 CERS1P27544 350 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 ATP6V0D1P61421 351 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 CAV1Q03135 178 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 CHIT1Q13231 466 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 UAP1Q16222 522 aaPredicted RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 PDK4Q16654 411 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 ZNF766Q5HY98 468 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 C1QL3Q5VWW1 255 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 FAM219BQ5XKK7 198 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 SULT1C3Q6IMI6 304 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 C8orf74Q6P047 294 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 C16orf47Q6ZP98 133 aaPredicted RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 CLNKQ7Z7G1 428 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 CENPLQ8N0S6 344 aaPredicted RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 BCORP1Q8N888 145 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 PDPRQ8NCN5 879 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 ELP5Q8TE02 316 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 THAP3Q8WTV1 239 aaPredicted RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 GAL3ST3Q96A11 431 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 QRFPRQ96P65 431 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 ATOH8Q96SQ7 321 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 LPAR4Q99677 370 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 LIN28AQ9H9Z2 209 aaKnown RBP11.14□□□□□ -0.63
LITAF-219ENST00000576334 NINJ2Q9NZG7 142 aa11.14□□□□□ -0.63
LITAF-219ENST00000576334 ANKDD1BA6NHY2 528 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 GABRR3A8MPY1 467 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 PSMD12O00232 456 aaPredicted RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 SAP18O00422 153 aaKnown RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 RASAL1O95294 804 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 C2P06681 752 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 CYC1P08574 325 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 MTHFD2P13995 350 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 IL10P22301 178 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 JAK1P23458 1154 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 STX2P32856 288 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 OR1C1Q15619 314 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 EXT1Q16394 746 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 MEP1AQ16819 746 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 ZNF787Q6DD87 383 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 ZNF793Q6ZN11 406 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 QSOX2Q6ZRP7 698 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 KRT78Q8N1N4 520 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 UHMK1Q8TAS1 419 aaKnown RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 NR4A3Q92570 626 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 ZNF354BQ96LW1 612 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 C5orf34Q96MH7 638 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 SORBS1Q9BX66 1292 aaKnown RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 CD244Q9BZW8 370 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 REXO4Q9GZR2 422 aaKnown RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 RNF32Q9H0A6 362 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 PNO1Q9NRX1 252 aaKnown RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 ZNF358Q9NW07 568 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 GPRC5BQ9NZH0 403 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 COPG2Q9UBF2 871 aa11.13□□□□□ -0.63
LITAF-219ENST00000576334 ZNF223Q9UK11 482 aaPredicted RBP11.13□□□□□ -0.63
LITAF-219ENST00000576334 UNC79Q9P2D8 2635 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 404.8 ms