RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 TMEM125Q96AQ2 219 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 SMIM10Q96HG1 83 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 DEFB126Q9BYW3 111 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 UCK2Q9BZX2 261 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 PRDM9Q9NQV7 894 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 DEPPQ9NTK1 212 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 ZFATQ9P243 1243 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 RNF6Q9Y252 685 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 CLDN16Q9Y5I7 305 aa13.69□□□□□ -0.22
TSR1-204ENST00000576112 NCKAP5O14513 1909 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 A0A0G2JN53 185 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 FCHO1O14526 889 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 ITGA10O75578 1167 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 PDE9AO76083 593 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 MYO1DO94832 1006 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 HIST1H2AGP0C0S8 130 aaPredicted RBP13.68□□□□□ -0.22
TSR1-204ENST00000576112 HIST1H2ADP20671 130 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 AHRP35869 848 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 AP1S2P56377 157 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 IL2P60568 153 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
TSR1-204ENST00000576112 CSHL1Q14406 222 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 PPP1R3AQ16821 1122 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 EMC4Q5J8M3 183 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 PPIL6Q8IXY8 311 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 POGLUT1Q8NBL1 392 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 C16orf52Q8NHV5 167 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 CREB3L4Q8TEY5 395 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 HIST1H2AHQ96KK5 128 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 HIST1H2AJQ99878 128 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 WDR83Q9BRX9 315 aaKnown RBP13.68□□□□□ -0.22
TSR1-204ENST00000576112 H2AFJQ9BTM1 129 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 LIN28AQ9H9Z2 209 aaKnown RBP13.68□□□□□ -0.22
TSR1-204ENST00000576112 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
TSR1-204ENST00000576112 MAP1AP78559 2803 aaPredicted RBP13.68□□□□□ -0.22
TSR1-204ENST00000576112 CDK2AP1O14519 115 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 SKP1P63208 163 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 C18orf21Q32NC0 220 aaPredicted RBP13.67□□□□□ -0.22
TSR1-204ENST00000576112 HECTD2Q5U5R9 776 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 THOC6Q86W42 341 aaKnown RBP13.67□□□□□ -0.22
TSR1-204ENST00000576112 CCDC71Q8IV32 467 aaPredicted RBP13.67□□□□□ -0.22
TSR1-204ENST00000576112 SCUBE1Q8IWY4 988 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.67□□□□□ -0.22
TSR1-204ENST00000576112 ZFP62Q8NB50 900 aaPredicted RBP13.67□□□□□ -0.22
TSR1-204ENST00000576112 NRGNQ92686 78 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 NCLNQ969V3 563 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 CERS2Q96G23 380 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 PELI2Q9HAT8 420 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 PNO1Q9NRX1 252 aaKnown RBP13.67□□□□□ -0.22
TSR1-204ENST00000576112 KCMF1Q9P0J7 381 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 FBXW2Q9UKT8 454 aa13.67□□□□□ -0.22
TSR1-204ENST00000576112 NPEPPSL1A6NEC2 478 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 TMEM200CA6NKL6 621 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 FAM166BA8MTA8 275 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 PSMD12O00232 456 aaPredicted RBP13.66□□□□□ -0.22
TSR1-204ENST00000576112 CDC7O00311 574 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 FANCGO15287 622 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 TOXO94900 526 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 MSX1P28360 303 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 HNRNPH1P31943 449 aaKnown RBP13.66□□□□□ -0.22
TSR1-204ENST00000576112 CLCN2P51788 898 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 GPR143P51810 404 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 BTN3A2P78410 334 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 CCZ1BP86790 482 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 CCZ1P86791 482 aaPredicted RBP13.66□□□□□ -0.22
TSR1-204ENST00000576112 RUNX2Q13950 521 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 ZNF460Q14592 562 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 RBBP5Q15291 538 aaKnown RBP13.66□□□□□ -0.22
TSR1-204ENST00000576112 SPANXN3Q5MJ09 141 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 HP1BP3Q5SSJ5 553 aaPredicted RBP13.66□□□□□ -0.22
TSR1-204ENST00000576112 TEDDM1Q5T9Z0 273 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 NIPAL1Q6NVV3 410 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 TRMT10BQ6PF06 316 aaKnown RBP13.66□□□□□ -0.22
TSR1-204ENST00000576112 NXPE4Q6UWF7 544 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 EID3Q8N140 333 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 TBC1D19Q8N5T2 526 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 SEC16BQ96JE7 1060 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 PWWP2AQ96N64 755 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 DEFB127Q9H1M4 99 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 SLC22A14Q9Y267 594 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
TSR1-204ENST00000576112 PABPN1LA6NDY0 278 aaKnown RBP13.65□□□□□ -0.22
TSR1-204ENST00000576112 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 G3V3Y1 287 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 OR6B1O95007 311 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 ENO2P09104 434 aaPredicted RBP13.65□□□□□ -0.22
TSR1-204ENST00000576112 CHRNB4P30926 498 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 NUP107P57740 925 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 TERF2Q15554 542 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 ADNP2Q6IQ32 1131 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 KIAA0408Q6ZU52 694 aa13.65□□□□□ -0.22
TSR1-204ENST00000576112 TMEM156Q8N614 296 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms