RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 OPTCQ9UBM4 332 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 ANAPC2Q9UJX6 822 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 MKL2Q9ULH7 1088 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PPT2Q9UMR5 302 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 PCDHGB7Q9Y5F8 929 aa8.16□□□□□ -1.1
SMG6-216ENST00000575176 A6NL46 340 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 SYCE1LA8MT33 242 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 MAGEB17A8MXT2 336 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 ESPNB1AK53 854 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 FAM227AF5H4B4 570 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 G3V2L1 256 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 PLPP1O14494 284 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 ERI3O43414 337 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 SLC28A2O43868 658 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 DLX3O60479 287 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 UGDHO60701 494 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 SEC24DO94855 1032 aaPredicted RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 C8orf89P0DMQ9 161 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 ITGAMP11215 1152 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 MAOAP21397 527 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 EEF1DP29692 281 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 PPP2R1BP30154 601 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 HNF4AP41235 474 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 GPR143P51810 404 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 LIM2P55344 173 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 IGLV3-21P80748 117 aaPredicted RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 FOXK1P85037 733 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 IRF8Q02556 426 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 OCA2Q04671 838 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 RGS1Q08116 209 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 KLRB1Q12918 225 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 RBBP5Q15291 538 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 MRM1Q6IN84 353 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 H3F3CQ6NXT2 135 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 JMJD6Q6NYC1 403 aaPredicted RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 LETMD1Q6P1Q0 360 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 ATG14Q6ZNE5 492 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 Q6ZS92 163 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 ABHD13Q7L211 337 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 NDUFAF7Q7L592 441 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 CUZD1Q86UP6 607 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 ARMC10Q8N2F6 343 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 TEX9Q8N6V9 391 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 TTLQ8NG68 377 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 OR2W6PQ8NHA6 318 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 HUS1BQ8NHY5 278 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 BRIX1Q8TDN6 353 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG6-216ENST00000575176 CAVIN3Q969G5 261 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 TBC1D20Q96BZ9 403 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 MTBPQ96DY7 904 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 FER1L6-AS2Q96M78 137 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 F2RL3Q96RI0 385 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 MRPL57Q9BQC6 102 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 NTMT1Q9BV86 223 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 CAPS2Q9BXY5 557 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 C12orf65Q9H3J6 166 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 CLK4Q9HAZ1 481 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 TNFRSF12AQ9NP84 129 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 MKS1Q9NXB0 559 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 C5AR2Q9P296 337 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 CPSF2Q9P2I0 782 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG6-216ENST00000575176 DAPP1Q9UN19 280 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 PPIEQ9UNP9 301 aaKnown RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 RNF11Q9Y3C5 154 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 PCDHGA10Q9Y5H3 936 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 V9GYY5 206 aaPredicted RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 RP1L1Q8IWN7 2480 aaPredicted RBP8.15□□□□□ -1.1
SMG6-216ENST00000575176 DOPEY2Q9Y3R5 2298 aa8.15□□□□□ -1.1
SMG6-216ENST00000575176 CRYBG3Q68DQ2 2970 aa8.15□□□□□ -1.11
SMG6-216ENST00000575176 CENPEQ02224 2701 aa8.15□□□□□ -1.11
SMG6-216ENST00000575176 UNC79Q9P2D8 2635 aa8.15□□□□□ -1.11
SMG6-216ENST00000575176 A0A0A6YYD5 115 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PABPN1LA6NDY0 278 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 GOLGA8RI6L899 631 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 UBFD1O14562 309 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 PCDH17O14917 1159 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 CLGNO14967 610 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 TMPRSS11DO60235 418 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 EEDO75530 441 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 PROCP04070 461 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 SERPINA7P05543 415 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 SERPIND1P05546 499 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 HEXBP07686 556 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PYGBP11216 843 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 GFAPP14136 432 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 EPB42P16452 691 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 IL10P22301 178 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 ATP5A1P25705 553 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 BSGP35613 385 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 SOX18P35713 384 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PIK3CBP42338 1070 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 PIK3CGP48736 1102 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 HNRNPH2P55795 449 aaKnown RBP8.14□□□□□ -1.11
SMG6-216ENST00000575176 RAB38P57729 211 aa8.14□□□□□ -1.11
SMG6-216ENST00000575176 SLC18A2Q05940 514 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms