RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SLC25A37Q9NYZ2 338 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SEC14L4Q9UDX3 406 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ABT1Q9ULW3 272 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 VPS9D1Q9Y2B5 631 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SPIN1Q9Y657 262 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 MUSKO15146 869 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ADAMDEC1O15204 470 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SHOXO15266 292 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 LYRM1O43325 122 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 CLEC2LP0C7M8 214 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 GGT2P36268 569 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 RPL35P42766 123 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 CRATP43155 626 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 STC1P52823 247 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 RRAS2P62070 204 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 C2orf80Q0P641 193 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 TSTA3Q13630 321 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SPHARQ15513 63 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 XKR7Q5GH72 579 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 LSM14AQ8ND56 463 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 ST8SIA2Q92186 375 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 PSMG2Q969U7 264 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SRRQ9GZT4 340 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 NSUN3Q9H649 340 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 SLC52A3Q9NQ40 469 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 FARSBQ9NSD9 589 aaKnown RBP9.22□□□□□ -0.93
CCDC40-212ENST00000574799 NKIRAS2Q9NYR9 191 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
CCDC40-212ENST00000574799 A0A075B6Q4 140 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-212ENST00000574799 GRXCR2A6NFK2 248 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 ARSBP15848 533 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 ATF6P18850 670 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 ADRA1AP35348 466 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-212ENST00000574799 RHAGQ02094 409 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 RGS1Q08116 209 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 GANABQ14697 944 aaKnown RBP9.21□□□□□ -0.93
CCDC40-212ENST00000574799 GPR68Q15743 365 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 SLC35F1Q5T1Q4 408 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 SAXO2Q658L1 398 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 FAM92BQ6ZTR7 304 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 GPR152Q8TDT2 470 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 CDKN2AIPNLQ96HQ2 116 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 RPRD1AQ96P16 312 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-212ENST00000574799 EBPLQ9BY08 206 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 SLC35C2Q9NQQ7 365 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 TLR8Q9NR97 1041 aaKnown RBP9.21□□□□□ -0.93
CCDC40-212ENST00000574799 CREBZFQ9NS37 354 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 SH3BP4Q9P0V3 963 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 PPIEQ9UNP9 301 aaKnown RBP9.21□□□□□ -0.93
CCDC40-212ENST00000574799 HS3ST4Q9Y661 456 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 VCANP13611 3396 aa9.21□□□□□ -0.93
CCDC40-212ENST00000574799 A0A1W2PQH9 124 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 M0QZ92 97 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 GLUD1P00367 558 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 PLATP00750 562 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 PROS1P07225 676 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 MMP2P08253 660 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CSF3P09919 207 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ANXA8P13928 327 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ASAH1Q13510 395 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 VMACQ2NL98 169 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 PUS10Q3MIT2 529 aaKnown RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CLVS2Q5SYC1 327 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 BCL2L15Q5TBC7 163 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 DENND1CQ8IV53 801 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CHPFQ8IZ52 775 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ZNF680Q8NEM1 530 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CEP76Q8TAP6 659 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ISG20Q96AZ6 181 aaKnown RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 HMCESQ96FZ2 354 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 HRASLS5Q96KN8 279 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 RETREG1Q9H6L5 497 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 BEX1Q9HBH7 125 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ASB1Q9Y576 335 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ATG2AQ2TAZ0 1938 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 EPB42P16452 691 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 TYMPP19971 482 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 KELP23276 732 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 PBX3P40426 434 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 GSTM5P46439 218 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 SOX9P48436 509 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CAV3P56539 151 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CSTF1Q05048 431 aaKnown RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 PPIGQ13427 754 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■■■□□ 15
CCDC40-212ENST00000574799 LARS2Q15031 903 aaKnown RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ZBTB37Q5TC79 503 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 MIB1Q86YT6 1006 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 TMC8Q8IU68 726 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 VPS37AQ8NEZ2 397 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 ASZ1Q8WWH4 475 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 NARS2Q96I59 477 aaKnown RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 KCTD7Q96MP8 289 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 CYP2S1Q96SQ9 504 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 SDHCQ99643 169 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 TCF25Q9BQ70 676 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms