RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 OR1L3Q8NH93 324 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 SMIM10Q96HG1 83 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 QRFPRQ96P65 431 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 DPY30Q9C005 99 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 FGF21Q9NSA1 209 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 TOR4AQ9NXH8 423 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 RAPGEFL1Q9UHV5 662 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ADAM29Q9UKF5 820 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 TXNDC9O14530 226 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 OR2B3O76000 313 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 ALOX12P18054 663 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 IL12AP29459 219 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 MAPK12P53778 367 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 ZFP36L1Q07352 338 aaKnown RBP22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 ILKQ13418 452 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 KRT72Q14CN4 511 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 TRIP6Q15654 476 aaKnown RBP22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 TCTE1Q5JU00 501 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 ACOT4Q8N9L9 421 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 C16orf78Q8WTQ4 265 aa22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 COPS7BQ9H9Q2 264 aaPredicted RBP22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 COL27A1Q8IZC6 1860 aaPredicted RBP22.83■■□□□ 1.24
ATPAF1-213ENST00000574428 LOC100653049A0A140TA62 436 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 NR5A2O00482 541 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 AKAP10O43572 662 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 KRT34O76011 436 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 MED26O95402 600 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 MSL3P1P0C860 447 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 T-ENOLP0DO92 83 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 IL1RNP18510 177 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 JAK1P23458 1154 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 ARFIP1P53367 373 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 CLDN8P56748 225 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 TAS2R50P59544 299 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 RBM44Q6ZP01 1051 aaKnown RBP22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 SNX32Q86XE0 403 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 C10orf90Q96M02 699 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 TMEM74Q96NL1 305 aa22.82■■□□□ 1.24
ATPAF1-213ENST00000574428 H0YHG0 523 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 H3BMH7 237 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ZFP36L2P47974 494 aaKnown RBP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 SLAMF1Q13291 335 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 C16orf72Q14CZ0 275 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 PDSS2Q86YH6 399 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 DTWD1Q8N5C7 304 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ZNF501Q96CX3 271 aaPredicted RBP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 FANCEQ9HB96 536 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 SLC22A7Q9Y694 548 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 HYKKA2RU49 373 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ZNF860A6NHJ4 632 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 HYAL3O43820 417 aaPredicted RBP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ATP5HO75947 161 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 COX4I1P13073 169 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 TSFMP43897 325 aaKnown RBP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ASMTP46597 345 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 CLDN6P56747 220 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 INSM1Q01101 510 aaPredicted RBP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 TRA2AQ13595 282 aaKnown RBP eCLIP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ASRGL1Q7L266 308 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 FAM9CQ8IZT9 166 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 ZBTB18Q99592 522 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 MYNNQ9NPC7 610 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 NAALAD2Q9Y3Q0 740 aa22.81■■□□□ 1.24
ATPAF1-213ENST00000574428 FITM1A5D6W6 292 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 IL3P08700 152 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 FAM58BPP0C7Q3 252 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 CPA2P48052 419 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 POLR2JP52435 117 aaKnown RBP22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 LIMK1P53667 647 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 MTTPP55157 894 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 ITGA1P56199 1179 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 E2F1Q01094 437 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 FOXM1Q08050 763 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 GRM7Q14831 915 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 HERC3Q15034 1050 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 MMP21Q8N119 569 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 TMEM132CQ8N3T6 1108 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 ZCCHC7Q8N3Z6 543 aaKnown RBP22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 KLHL29Q96CT2 875 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 NSL1Q96IY1 281 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 OR6C1Q96RD1 312 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 SIDT1Q9NXL6 827 aaKnown RBP22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 TAGLN3Q9UI15 199 aa22.8■■□□□ 1.24
ATPAF1-213ENST00000574428 FAM234BA2RU67 622 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 SCELO95171 688 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 PRPS1L1P21108 318 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 CSTF2P33240 577 aaKnown RBP eCLIP22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 MC1RQ01726 317 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 ACY1Q03154 408 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 CYLC2Q14093 348 aaPredicted RBP22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 RCAN2Q14206 197 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 SLC9A5Q14940 896 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 PRAMEF17Q5VTA0 474 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 BLOC1S3Q6QNY0 202 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 GLRX5Q86SX6 157 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 RIMKLAQ8IXN7 391 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 KIAA2013Q8IYS2 634 aa22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 TTC29Q8NA56 475 aaPredicted RBP22.79■■□□□ 1.24
ATPAF1-213ENST00000574428 TM4SF18Q96CE8 201 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms