RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 RPTNQ6XPR3 784 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 TICAM1Q8IUC6 712 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 SRRM1Q8IYB3 904 aaKnown RBP19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 KRT78Q8N1N4 520 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 BBOF1Q8ND07 529 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 TTLQ8NG68 377 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 DEFB126Q9BYW3 111 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 DERL2Q9GZP9 239 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 DPH5Q9H2P9 285 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 SAYSD1Q9NPB0 183 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 WWOXQ9NZC7 414 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 TINAGQ9UJW2 476 aa19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 MTO1Q9Y2Z2 717 aaKnown RBP19.78■□□□□ 0.76
CHRNB1-206ENST00000574054 ASPDHA6ND91 283 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 ESRRAP11474 423 aaPredicted RBP19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 GRNP28799 593 aaKnown RBP19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 HNRNPH1P31943 449 aaKnown RBP19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 CYB561P49447 251 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 MLF1P58340 268 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 CALCOCO2Q13137 446 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 TGFBIQ15582 683 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 KRTCAP3Q53RY4 240 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 FBXO48Q5FWF7 155 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 GPSM1Q86YR5 675 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 KLHDC8AQ8IYD2 350 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 ZNF808Q8N4W9 903 aaPredicted RBP19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 SNX31Q8N9S9 440 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 THAP3Q8WTV1 239 aaPredicted RBP19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 CDKL2Q92772 493 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 TSPAN17Q96FV3 270 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 PDLIM2Q96JY6 352 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 MCMBPQ9BTE3 642 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 PRM3Q9NNZ6 103 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 PNO1Q9NRX1 252 aaKnown RBP19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 RNF14Q9UBS8 474 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 PYCARDQ9ULZ3 195 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 MMACHCQ9Y4U1 282 aa19.77■□□□□ 0.76
CHRNB1-206ENST00000574054 TRBV11-1A0A0K0K1C0 115 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 CXorf49A8MYA2 514 aaPredicted RBP19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 FCHO1O14526 889 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 PHGDHO43175 533 aaKnown RBP19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 MYO1DO94832 1006 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 CCDC166P0CW27 439 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 PRF1P14222 555 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 SSTR1P30872 391 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 PLA2G16P53816 162 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 ILF2Q12905 390 aaKnown RBP19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 TCAIMQ8N3R3 496 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 NFAM1Q8NET5 270 aaPredicted RBP19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 TMEM125Q96AQ2 219 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 CNOT10Q9H9A5 744 aaKnown RBP19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 DNAJC11Q9NVH1 559 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 FBXW2Q9UKT8 454 aa19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 KLF2Q9Y5W3 355 aaPredicted RBP19.76■□□□□ 0.75
CHRNB1-206ENST00000574054 A0A088AWK7 358 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 LRIT2A6NDA9 550 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 ANKDD1BA6NHY2 528 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 ENO4A6NNW6 628 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 CLGNO14967 610 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 B3GALT2O43825 422 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 NME2P1O60361 137 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 ZNF24P17028 368 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 ZNF10P21506 573 aaPredicted RBP19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 NME2P22392 152 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 HTR1EP28566 365 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 HSPA7P48741 367 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 HLCSP50747 726 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 RUNX2Q13950 521 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 SPPL2CQ8IUH8 684 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 SIAH3Q8IW03 269 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 FAM47BQ8NA70 645 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 ANP32BQ92688 251 aaKnown RBP19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 MS4A6EQ96DS6 147 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 ERP44Q9BS26 406 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 TMEM79Q9BSE2 394 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 CAPS2Q9BXY5 557 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 RUBCNLQ9H714 662 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 PRTFDC1Q9NRG1 225 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 GPRC5BQ9NZH0 403 aa19.75■□□□□ 0.75
CHRNB1-206ENST00000574054 TACC2O95359 2948 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 DCHS2Q6V1P9 2916 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 FAM187AA6NFU0 413 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 CDK2AP1O14519 115 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 TAPBPO15533 448 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 ASNA1O43681 348 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 ABOP16442 354 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 STMN1P16949 149 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 GSTM2P28161 218 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 TNFRSF8P28908 595 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 PPP2R1BP30154 601 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 CLCN2P51788 898 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 RAB38P57729 211 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 SLC13A2Q13183 592 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 XKR6Q5GH73 641 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 BNC2Q6ZN30 1099 aaPredicted RBP19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 SCUBE1Q8IWY4 988 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 MCEMP1Q8IX19 187 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 CPSF7Q8N684 471 aaKnown RBP19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 B3GNT7Q8NFL0 401 aa19.74■□□□□ 0.75
CHRNB1-206ENST00000574054 EXT2Q93063 718 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms