RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GMFGO60234 142 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 SNNO75324 88 aaPredicted RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 LINC00271P0C7V0 271 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ITGA2P17301 1181 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 NOS3P29474 1203 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ARSFP54793 590 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 PSMD4P55036 377 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 FAM83HQ6ZRV2 1179 aaPredicted RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 SPNS2Q8IVW8 549 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 DNAJB8Q8NHS0 232 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 UTP15Q8TED0 518 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 WDR60Q8WVS4 1066 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 IRF2BPLQ9H1B7 796 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 LRMDAQ9H2I8 198 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 RPF2Q9H7B2 306 aaKnown RBP9.68□□□□□ -0.86
SMG6-213ENST00000573166 KIR3DX1Q9H7L2 352 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ZBTB26Q9HCK0 441 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 NEUROD4Q9HD90 331 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 TAS2R1Q9NYW7 299 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 MAT2BQ9NZL9 334 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 CALML5Q9NZT1 146 aa9.68□□□□□ -0.86
SMG6-213ENST00000573166 ZNF821O75541 412 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 OR6A2O95222 327 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 C6orf47O95873 294 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 GRK6P43250 576 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 RANBP1P43487 201 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 CCT3P49368 545 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 IYDQ6PHW0 289 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SLC29A4Q7RTT9 530 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 KRTCAP2Q8N6L1 136 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 AGBL5Q8NDL9 886 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ZNF563Q8TA94 476 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 PHF10Q8WUB8 498 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 ZDHHC5Q9C0B5 715 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ZSCAN32Q9NX65 697 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 NFKBIL1Q9UBC1 381 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 RALGAPA2Q2PPJ7 1873 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 PSMG1O95456 288 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 FGF4P08620 206 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ALOX5P09917 674 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 UGT2B7P16662 529 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 IL7RP16871 459 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ENGP17813 658 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 GM2AP17900 193 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 IFNGR2P38484 337 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 GUCA1AP43080 201 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 KHKP50053 298 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 NRG3P56975 720 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 RGS8P57771 180 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 SHC2P98077 582 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 LASP1Q14847 261 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 DEPDC1Q5TB30 811 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 KANK2Q63ZY3 851 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ATG9BQ674R7 924 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 PROSER1Q86XN7 944 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SPPL2CQ8IUH8 684 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 OR4N5Q8IXE1 308 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 APIPQ96GX9 242 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 CNDP2Q96KP4 475 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 MEAF6Q9HAF1 191 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SAMD4AQ9UPU9 718 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 A0A0A6YYC8 382 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 TRBC2A0A5B9 178 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 KRBA1A5PL33 1030 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 I3L1I5 382 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 PRMT3O60678 531 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SCN2BO60939 215 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 CNR2P34972 360 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 PIK3CBP42338 1070 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 GSSP48637 474 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 RPS15P62841 145 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 PDCD4Q53EL6 469 aaKnown RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 NKAIN2Q5VXU1 208 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 POMZP3Q6PJE2 187 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 NET1Q7Z628 596 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 APLFQ8IW19 511 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 TMEM156Q8N614 296 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 TP53I13Q8NBR0 393 aaPredicted RBP9.67□□□□□ -0.86
SMG6-213ENST00000573166 WDR48Q8TAF3 677 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ZUFSPQ96AP4 578 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 LRRC58Q96CX6 371 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ART5Q96L15 291 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 MAP3K3Q99759 626 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 FNDC11Q9BVV2 318 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 EPB41L1Q9H4G0 881 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 PISDQ9UG56 409 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 CFL2Q9Y281 166 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 C1orf226A1L170 272 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 FAM86C2PA6NEL3 165 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SLC25A12O75746 678 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 OR1D5P58170 312 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SLC34A1Q06495 639 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 BNIP3Q12983 259 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 PEX5LQ8IYB4 626 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 SFRP1Q8N474 314 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ZNF740Q8NDX6 193 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 OR7A2PQ8NGA2 310 aa9.67□□□□□ -0.86
SMG6-213ENST00000573166 ASB12Q8WXK4 309 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms